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Version 4.0.4
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@MikeAxtell MikeAxtell released this 14 May 18:00
· 28 commits to master since this release
v4.0.4
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Bugfixes and enhancements, including:

  • Fixed Issue #151 where ShortStack was not properly handling bamfiles that contained secondary alignments.
  • Fixed Issue #150 where ShortStack was not creating Counts.txt file when user input more than one bamfile.
  • Addressed Issue #152 by adding option to disable bigwig track creation (--no_bigwigs) and by adding a "How to go FAST" section to the README.
  • Fixed errors in the README per issue #148
  • Fixed bug found in #146
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