Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add deep learning data integration lab #94

Merged
merged 1 commit into from
Sep 12, 2024
Merged

Add deep learning data integration lab #94

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
17 changes: 7 additions & 10 deletions schedule.html
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -185,10 +185,7 @@ <h5 class="anchored" data-anchor-id="day-2">Day 2</h5>
</summary>
<ul>
<li>
<a href="./session_ml/DeepLearningDataIntegration/DeepLearningDataIntegration.html">DL Notebook</a>
</li>
<li>
<a href="./session_ml/DeepLearningDataIntegration/DeepLearning_SingleCell_10X_1.3Mcells.html">DL in Single Cell</a>
<a href="./session_ml/DeepLearningDataIntegration/SingleCell_OmicsIntegration.html"> CCA + WNN integration</a>
</li>
</ul>
</details>
Expand All @@ -200,10 +197,7 @@ <h5 class="anchored" data-anchor-id="day-2">Day 2</h5>
</summary>
<ul>
<li>
<a href="./session_ml/DeepLearningDataIntegration/DeepLearningDataIntegration.html">DL Notebook</a>
</li>
<li>
<a href="./session_ml/DeepLearningDataIntegration/DeepLearning_SingleCell_10X_1.3Mcells.html">DL in Single Cell</a>
<a href="./session_ml/DeepLearningDataIntegration/SingleCell_OmicsIntegration.html"> CCA + WNN integration</a>
</li>
</ul>
</details>
Expand All @@ -228,10 +222,13 @@ <h5 class="anchored" data-anchor-id="day-2">Day 2</h5>
</summary>
<ul>
<li>
<a href="./session_ml/SingleCell/SingleCell_OmicsIntegration.html">Single Cell Notebook</a>
<a href="https://oisb-h24-lab-deeplearningintegration.serve.scilifelab.se/doc/workspaces/auto-x/tree/DeepLearningDataIntegration.ipynb">Deep Learning for data integration lab on s-serve</a>
</li>
<li>
<a href="./session_ml/DeepLearningDataIntegration/lab/DeepLearningDataIntegration.html">Deep Learning for data integration lab html</a>
</li>
<li>
<a href="./session_ml/UMAP_DataIntegration/UMAP_DataIntegration.html">UMAP Notebook</a>
Docker image: <code>docker pull rasoolsnbis/omicsint_h24:session_ml_deep_learning_integration</code>
</li>
</ul>
</details>
Expand Down
12 changes: 6 additions & 6 deletions schedule.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -118,8 +118,7 @@ title: 'Schedule - Omics integration and systems biology - 2024'
<details>
<summary>Resources</summary>
<ul>
<li><a href="./session_ml/DeepLearningDataIntegration/DeepLearningDataIntegration.html">DL Notebook</a></li>
<li><a href="./session_ml/DeepLearningDataIntegration/DeepLearning_SingleCell_10X_1.3Mcells.html">DL in Single Cell</a></li>
<li><a href="./session_ml/DeepLearningDataIntegration/SingleCell_OmicsIntegration.html"> CCA + WNN integration</a></li>
</ul>
</details>

Expand All @@ -129,8 +128,7 @@ title: 'Schedule - Omics integration and systems biology - 2024'
<details>
<summary>Resources</summary>
<ul>
<li><a href="./session_ml/DeepLearningDataIntegration/DeepLearningDataIntegration.html">DL Notebook</a></li>
<li><a href="./session_ml/DeepLearningDataIntegration/DeepLearning_SingleCell_10X_1.3Mcells.html">DL in Single Cell</a></li>
<li><a href="./session_ml/DeepLearningDataIntegration/SingleCell_OmicsIntegration.html"> CCA + WNN integration</a></li>
</ul>
</details>

Expand All @@ -152,8 +150,10 @@ title: 'Schedule - Omics integration and systems biology - 2024'
<details>
<summary>Resources</summary>
<ul>
<li><a href="./session_ml/SingleCell/SingleCell_OmicsIntegration.html">Single Cell Notebook</a></li>
<li><a href="./session_ml/UMAP_DataIntegration/UMAP_DataIntegration.html">UMAP Notebook</a></li>
<li><a href="https://oisb-h24-lab-deeplearningintegration.serve.scilifelab.se/doc/workspaces/auto-x/tree/DeepLearningDataIntegration.ipynb">Deep Learning for data integration lab on s-serve</a></li>
<li><a href="./session_ml/DeepLearningDataIntegration/lab/DeepLearningDataIntegration.html">Deep Learning for data integration lab html</a></li>
<li>Docker image: <code>docker pull rasoolsnbis/omicsint_h24:session_ml_deep_learning_integration</code>
</li>
</ul>
</details>

Expand Down
Binary file removed session_ml/DeepLearningDataIntegration/DeepLearningOmicsIntegration_Oskolkov.pdf
View file
Open in desktop
Binary file not shown.
Binary file removed session_ml/DeepLearningDataIntegration/DeepLearningOmicsIntegration_Oskolkov.ppt
View file
Open in desktop
Binary file not shown.
Loading