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annotation false positive #16

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balhoff opened this issue Oct 25, 2019 · 1 comment
Open

annotation false positive #16

balhoff opened this issue Oct 25, 2019 · 1 comment

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@balhoff
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balhoff commented Oct 25, 2019

See NCATS-Gamma/robokop#390
@gaurav
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gaurav commented Nov 11, 2019

I've found the code in Scigraph that trims English stop words from the start and end of matches. "a" is indeed on the list of Lucene's English stop words.

I'm not sure if there's an easier fix for this than to add a configuration setting to our fork of Scigraph. We could try overloading EntityProcessorImpl and writing our own version of the getAnnotations() method, but that seems unnecessarily complicated.

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@gaurav @balhoff