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provenance update #76

Merged
merged 1 commit into from
Aug 3, 2021
Merged

provenance update #76

merged 1 commit into from
Aug 3, 2021

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colleenXu
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@colleenXu colleenXu commented Aug 3, 2021

Help address biothings/biothings_explorer#208

fix: add x-translator.infores-curie, replace source strings with infores curies

also note: 3 apis don't have the hard-coded source field now:

  • text mining co-occurrence api
  • text mining targeted association api
  • drug response kp api

also note: one api fits situation C of https://github.com/biothings/BioThings_Explorer_TRAPI/issues/208\#issuecomment-866620512: tcga mutational freq api

…res curies

also note: 3 apis don't have the hard-coded source field now:
- text mining co-occurrence api
- text mining targeted association api
- drug response kp api

also note: one api fits situation C of https://github.com/biothings/BioThings_Explorer_TRAPI/issues/208\#issuecomment-866620512: tcga mutational freq api
@colleenXu
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colleenXu commented Aug 3, 2021

Other changes include:

  • MyChem, MyDisease: change scopes/fields/response-mapping for a few operations to improve retrieval
  • that a few refs are removed as well, since they were semantic errors (didn't affect x-bte annotation)

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