Scikit added to conda #3953
Workflow file for this run
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| # A single CI script with github workflow to test NNPDF, and upload the conda package and documentation | |
| name: Tests | |
| on: [push] | |
| concurrency: | |
| group: ${{ github.head_ref || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| python-version: ["3.9", "3.10", "3.11"] | |
| include: | |
| - os: ubuntu-latest | |
| CONDA_OS: linux-64 | |
| - os: macos-latest | |
| CONDA_OS: osx-64 | |
| fail-fast: false | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| NETRC_FILE: ${{ secrets.NETRC_FILE }} | |
| NNPDF_SSH_KEY: ${{ secrets.NNPDF_SSH_KEY }} | |
| PYTHONHASHSEED: "0" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-tags: true | |
| fetch-depth: 0 | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| use-mamba: true | |
| auto-update-conda: true | |
| activate-environment: test | |
| - name: Install macOS SDK | |
| if: startsWith(matrix.os, 'macOS') | |
| shell: bash -l {0} | |
| run: | | |
| curl -L -O https://data.nnpdf.science/MacOSX10.9.sdk.tar.xz | |
| tar xfz MacOSX10.9.sdk.tar.xz -C $CONDA_PREFIX | |
| - name: Setup conda | |
| shell: bash -l {0} | |
| run: | | |
| echo "$NETRC_FILE" | base64 --decode > ~/.netrc | |
| conda config --remove channels defaults | |
| conda config --append channels conda-forge | |
| conda config --prepend channels https://packages.nnpdf.science/public | |
| conda config --set show_channel_urls true | |
| - name: Install boa in Linux | |
| if: startsWith(matrix.os, 'ubuntu') | |
| shell: bash -l {0} | |
| run: | | |
| conda install boa --yes | |
| - name: Build recipe and run tests on linux | |
| if: startsWith(matrix.os, 'ubuntu') | |
| shell: bash -l {0} | |
| run: | | |
| conda mambabuild -q conda-recipe | |
| - name: Extra setup settings for macOS and install boa | |
| if: startsWith(matrix.os, 'macOS') | |
| shell: bash -l {0} | |
| run: | | |
| conda config --prepend channels defaults | |
| conda install boa conda-build==3.28 --yes | |
| - name: Build recipe and run tests on macOS | |
| if: startsWith(matrix.os, 'macOS') | |
| shell: bash -l {0} | |
| run: | | |
| export CONDA_BUILD_SYSROOT=$CONDA_PREFIX/MacOSX10.9.sdk | |
| conda build -q conda-recipe | |
| - name: Upload conda package to NNPDF server | |
| if: ${{ github.ref == 'refs/heads/master' || startsWith(github.ref, 'refs/tags/')}} | |
| shell: bash -l {0} | |
| run: | | |
| KEY=$( mktemp ) | |
| echo "$NNPDF_SSH_KEY" | base64 --decode > "$KEY" | |
| scp -i "$KEY" -o StrictHostKeyChecking=no\ | |
| $CONDA_PREFIX/conda-bld/${{matrix.CONDA_OS}}/*.tar.bz2 \ | |
| dummy@packages.nnpdf.science:~/packages/conda/${{matrix.CONDA_OS}} | |
| - name: Build and upload sphinx documentation to NNPDF server | |
| if: startsWith(matrix.os, 'ubuntu') && github.ref == 'refs/heads/master' && matrix.python-version == '3.9' | |
| shell: bash -l {0} | |
| run: | | |
| KEY=$( mktemp ) | |
| echo "$NNPDF_SSH_KEY" | base64 --decode > "$KEY" | |
| conda install nnpdf --yes | |
| cd doc/sphinx | |
| make html | |
| scp -r -i "$KEY" -o StrictHostKeyChecking=no\ | |
| build/html/* \ | |
| dummy@packages.nnpdf.science:~/sphinx-docs/ |