add g-w pygw to PYTHONPATH in run_jedi_exe scripts (#357)

NOAA-EMC · Apr 22, 2023 · 1e7d993 · 1e7d993
1 parent dc5db4a
commit 1e7d993
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diff --git a/test/atm/run_jedi_exe_3denvar.sh b/test/atm/run_jedi_exe_3denvar.sh
@@ -30,6 +30,13 @@ elif [ "$machine" = "orion" ]; then
     gdasfix="/work2/noaa/da/cmartin/GDASApp/fix"
 fi
 
+# Setup python path for workflow utilities and tasks
+export HOMEgfs=$srcdir/../../ # TODO: HOMEgfs had to be hard-coded in config
+echo $HOMEgfs
+pygwPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/pygw/src"
+PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${pygwPATH}"
+export PYTHONPATH
+
 # Create test run directory
 mkdir -p ${bindir}/test/atm/global-workflow/testrun/gdas_single_test_3denvar
 cd ${bindir}/test/atm/global-workflow/testrun/gdas_single_test_3denvar

diff --git a/test/atm/run_jedi_exe_3dhofx.sh b/test/atm/run_jedi_exe_3dhofx.sh
@@ -30,6 +30,13 @@ elif [ "$machine" = "orion" ]; then
     gdasfix="/work2/noaa/da/cmartin/GDASApp/fix"
 fi
 
+# Setup python path for workflow utilities and tasks
+export HOMEgfs=$srcdir/../../ # TODO: HOMEgfs had to be hard-coded in config
+echo $HOMEgfs
+pygwPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/pygw/src"
+PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${pygwPATH}"
+export PYTHONPATH
+
 # Create test run directory
 mkdir -p ${bindir}/test/atm/global-workflow/testrun/gdas_single_test_hofx3d
 cd ${bindir}/test/atm/global-workflow/testrun/gdas_single_test_hofx3d

diff --git a/test/atm/run_jedi_exe_3dvar.sh b/test/atm/run_jedi_exe_3dvar.sh
@@ -30,6 +30,13 @@ elif [ "$machine" = "orion" ]; then
     gdasfix="/work2/noaa/da/cmartin/GDASApp/fix"
 fi
 
+# Setup python path for workflow utilities and tasks
+export HOMEgfs=$srcdir/../../ # TODO: HOMEgfs had to be hard-coded in config
+echo $HOMEgfs
+pygwPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/pygw/src"
+PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${pygwPATH}"
+export PYTHONPATH
+
 # Create test run directory
 mkdir -p ${bindir}/test/atm/global-workflow/testrun/gdas_single_test_3dvar
 cd ${bindir}/test/atm/global-workflow/testrun/gdas_single_test_3dvar

diff --git a/test/atm/run_jedi_exe_letkf.sh b/test/atm/run_jedi_exe_letkf.sh
@@ -30,6 +30,13 @@ elif [ "$machine" = "orion" ]; then
     gdasfix="/work2/noaa/da/cmartin/GDASApp/fix"
 fi
 
+# Setup python path for workflow utilities and tasks
+export HOMEgfs=$srcdir/../../ # TODO: HOMEgfs had to be hard-coded in config
+echo $HOMEgfs
+pygwPATH="${HOMEgfs}/ush/python:${HOMEgfs}/ush/python/pygw/src"
+PYTHONPATH="${PYTHONPATH:+${PYTHONPATH}:}${pygwPATH}"
+export PYTHONPATH
+
 # Create test run directory
 mkdir -p ${bindir}/test/atm/global-workflow/testrun/gdas_single_test_letkf
 cd ${bindir}/test/atm/global-workflow/testrun/gdas_single_test_letkf