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Issue #120: updates to address NCO GFS v16 DA bugzillas
* scripts/exgdas_enkf_fcst.sh - remove hardwired default path for NDATE * ush/build_all_cmake.sh - add NCO build option * ush/prune_4nco_global.sh - remove non GFS DA components from working directory
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,210 @@ | ||
| #!/bin/sh | ||
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| # This script removes or restores directories and/or files found in | ||
| # the rlist below from the current working directory. This script | ||
| # is intended to be executed when NCO implements GFS DA updates. | ||
| # NCO does not want package installations for operations to include | ||
| # non-operational code. This script removes directories and files | ||
| # not used by operations from the installation directory. | ||
| # | ||
| # Two modes are supported: prune, restore | ||
| # prune: use git rm -r to remove directories and files. | ||
| # The directories and files to remove are found | ||
| # in rlist below | ||
| # restore: use git RESET head and git checkout to restore | ||
| # removed directories and files | ||
| # | ||
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| set -ex | ||
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| mode=$1 | ||
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| # Check mode and set string | ||
| if [[ "$mode" = "prune" ]]; then | ||
| string="rm -r" | ||
| elif [[ "$mode" = "restore" ]]; then | ||
| string="reset HEAD" | ||
| else | ||
| echo " " | ||
| echo "***ERROR*** invalid mode= $mode" | ||
| echo " valid modes are prune or restore" | ||
| echo " " | ||
| exit | ||
| fi | ||
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| # Set root directory | ||
| cd .. | ||
| topdir=$(pwd) | ||
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| echo " " | ||
| echo "Execute git $string in $topdir" | ||
| echo " " | ||
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| # Process top level directories | ||
| cd $topdir | ||
| rlist="regression src/GSD unit-tests" | ||
| for type in $rlist; do | ||
| git $string ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git $string ${type}" | ||
| exit | ||
| fi | ||
| if [[ "$mode" = "restore" ]]; then | ||
| git checkout ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git checkout ${type}" | ||
| exit | ||
| fi | ||
| fi | ||
| done | ||
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| # Process doc directories and files | ||
| cd $topdir/doc | ||
| rlist="EnKF_user_guide GSI_user_guide README.discover" | ||
| for type in $rlist; do | ||
| git $string ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git $string ${type}" | ||
| exit | ||
| fi | ||
| if [[ "$mode" = "restore" ]]; then | ||
| git checkout ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git checkout ${type}" | ||
| exit | ||
| fi | ||
| fi | ||
| done | ||
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| # Process scripts directories and files | ||
| cd $topdir/scripts | ||
| rlist="exurma2p5_gsianl.sh" | ||
| for type in $rlist; do | ||
| git $string ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git $string ${type}" | ||
| exit | ||
| fi | ||
| if [[ "$mode" = "restore" ]]; then | ||
| git checkout ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git checkout ${type}" | ||
| exit | ||
| fi | ||
| fi | ||
| done | ||
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| # Process ush directories and files | ||
| cd $topdir/ush | ||
| rlist="build.comgsi EnKF com Get_Initial_Files gfs_truncate_enkf llsub para refactor_4nco_global run_arw rungsi sub" | ||
| for type in $rlist; do | ||
| git $string ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git $string ${type}" | ||
| exit | ||
| fi | ||
| if [[ "$mode" = "restore" ]]; then | ||
| git checkout ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git checkout ${type}" | ||
| exit | ||
| fi | ||
| fi | ||
| done | ||
|
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| # Process util directories and files | ||
| cd $topdir/util | ||
| rlist="Aero Analysis_Utilities Baseline Config Correlated_Obs DTC EFSOI FOV GEN_BE_V2.0 GMI_BUFR MODIS_AOD Misc NCEP NMC_Bkerror README Radar_Monitor Radiance_bias_correction_Utilities Radiance_Utilities Single_Observation bufr_tools global_angupdate gsienvreport.sh ndate python_utilities radar_process zero_biascoeff" | ||
| for type in $rlist; do | ||
| git $string ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git $string ${type}" | ||
| exit | ||
| fi | ||
| if [[ "$mode" = "restore" ]]; then | ||
| git checkout ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git checkout ${type}" | ||
| exit | ||
| fi | ||
| fi | ||
| done | ||
|
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| # Process util/EnKF directories and files | ||
| cd $topdir/util/EnKF | ||
| rlist="arw python_utilities" | ||
| for type in $rlist; do | ||
| git $string ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git $string ${type}" | ||
| exit | ||
| fi | ||
| if [[ "$mode" = "restore" ]]; then | ||
| git checkout ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git checkout ${type}" | ||
| exit | ||
| fi | ||
| fi | ||
| done | ||
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| # Process util/EnKF/gfs/src directories and files | ||
| cd $topdir/util/EnKF/gfs/src | ||
| rlist="adjustps misc preproc gribmean recenterncio_hybgain recenternemsiop_hybgain" | ||
| for type in $rlist; do | ||
| git $string ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git $string ${type}" | ||
| exit | ||
| fi | ||
| if [[ "$mode" = "restore" ]]; then | ||
| git checkout ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git checkout ${type}" | ||
| exit | ||
| fi | ||
| fi | ||
| done | ||
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| # Process util/Radiance_Monitor/nwprod | ||
| cd $topdir/util/Radiance_Monitor/nwprod | ||
| rlist="gdas_radmon.v2.0.2 nam_radmon.v2.0.0 radmon_shared.v2.0.0 radmon_shared.v2.0.1 radmon_shared.v2.0.2 radmon_shared.v2.0.3 radmon_shared.v2.0.4" | ||
| for type in $rlist; do | ||
| git $string ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git $string ${type}" | ||
| exit | ||
| fi | ||
| if [[ "$mode" = "restore" ]]; then | ||
| git checkout ${type}* | ||
| rc=$? | ||
| if [[ $rc -ne 0 ]]; then | ||
| echo "***ERROR* git checkout ${type}" | ||
| exit | ||
| fi | ||
| fi | ||
| done |