Problem occurred when building GSI on HERA

[emilyhcliu]

Issue found while building GSI from the forked NOAA-EMC:master

I followed Kate's e-mail regarding the model update for python and cmake, and updated modules accordingly in GSI/modulefiles/modulefiles.ProdGSI.hera:

# python
module use -a /contrib/anaconda/modulefiles
module load anaconda/2.3.0

module use -a /contrib/cmake/modulefiles
module load cmake/3.9.0

During the build process, I ran into the following error message:

Configuring utility in adderrspec.fd
Configuring utility in adjustps.fd
Configuring utility in calc_increment_ens.fd
Configuring utility in calc_increment_serial.fd
Configuring utility in getnstensmeanp.fd
Configuring utility in getsfcensmeanp.fd
Configuring utility in getsfcnstensupdp.fd
Configuring utility in getsigensmeanp_smooth.fd
Configuring utility in getsigensstatp.fd
 hey, incl dirs are /apps/intel/compilers_and_libraries_2018/linux/mpi/intel64/include/gfortran;/apps/intel/compilers_and_libraries_2018/linux/mpi/intel64/include 
Configuring utility in gribmean.fd
Configuring utility in recenternemsiop_hybgain.fd
Configuring utility in recentersigp.fd
CMake Error: The following variables are used in this project, but they are set to NOTFOUND.
Please set them or make sure they are set and tested correctly in the CMake files:
FRAMEMODULE
    linked by target "global_gsi.x" in directory /scratch1/NCEPDEV/da/Emily.Liu/JEDI-GSI/GSI/src/gsi
FRAMEPACK
    linked by target "global_gsi.x" in directory /scratch1/NCEPDEV/da/Emily.Liu/JEDI-GSI/GSI/src/gsi
IOINT_LIB
    linked by target "global_gsi.x" in directory /scratch1/NCEPDEV/da/Emily.Liu/JEDI-GSI/GSI/src/gsi
WRFNETCDF_LIB
    linked by target "global_gsi.x" in directory /scratch1/NCEPDEV/da/Emily.Liu/JEDI-GSI/GSI/src/gsi

-- Configuring incomplete, errors occurred!

I also checked out GSI master from gerrit:ProdGSI and modified the modulefiles as described above. The GSI build process completed successfully on HERA.

I am wondering if I missed something when I tried to build the GSI master checked out from GitHub?

[RussTreadon-NOAA]

Did you clone via "git clone https://github.com/NOAA-EMC/GSI.git ."?

fix and libsrc point to submodules. Please include "--recursive" to clone the submodules. That is, execute "git clone --recursive https://github.com/NOAA-EMC/GSI.git ."

Try executing the following in /scratch1/NCEPDEV/da/Emily.Liu/JEDI-GSI/GSI
"git submodule update --init --recursive"

After this "cd ush" and execute "./build_all_cmake.sh"

Following the above steps in my copy of /scratch1/NCEPDEV/da/Emily.Liu/JEDI-GSI/GSI yielded a complete build on Hera.

[emilyhcliu]

@RussTreadon-NOAA Thanks a lot. The build works for me now.

[RussTreadon-NOAA]

Build works. Issued closed.