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correct the computation of QP parameter, add QKK output parameter, ch… #559

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Run time

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Job	Run time
setup	16s
build (Ifremer1)	1m 47s
build (NCEP_st2)	1m 43s
build (NCEP_st4)	1m 39s
build (ite_pdlib)	2m 17s
build (NCEP_st4sbs)	2m 20s
build (NCEP_glwu)	2m 37s
build (OASACM)	1m 45s
build (UKMO)	2m 2s
build (MULTI_ESMF)	1m 21s
	17m 47s