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necessary changes to allow graph execution in dataloader #152

Merged
merged 4 commits into from
Nov 1, 2022
Merged

necessary changes to allow graph execution in dataloader #152

merged 4 commits into from
Nov 1, 2022

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jperez999
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This PR is necessary to allow the dataloader to be able to handle graph execution on a batch basis. Some of changes required here are not great this is because we dont have an abstraction that is for merlin in general. We were trying to move towards this but after rigorous discussion it was decided those changes were unnecessary. The changes that would have made this much easier can be found here: NVIDIA-Merlin/systems#159. Given that we deal with multiple different types of data all with their own dtypes to represent that data. As mentioned in Systems 159 a long time ago.

@jperez999 jperez999 self-assigned this Oct 13, 2022
@jperez999 jperez999 added the enhancement New feature or request label Oct 13, 2022
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GitHub pull request #152 of commit c9eed9da9744321904b5ae99aa325dd02c469c4d, no merge conflicts.
Running as SYSTEM
Setting status of c9eed9da9744321904b5ae99aa325dd02c469c4d to PENDING with url https://10.20.13.93:8080/job/merlin_core/252/console and message: 'Pending'
Using context: Jenkins
Building on master in workspace /var/jenkins_home/workspace/merlin_core
using credential ce87ff3c-94f0-400a-8303-cb4acb4918b5
 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/NVIDIA-Merlin/core # timeout=10
Fetching upstream changes from https://github.com/NVIDIA-Merlin/core
 > git --version # timeout=10
using GIT_ASKPASS to set credentials login for merlin-systems username and pass
 > git fetch --tags --force --progress -- https://github.com/NVIDIA-Merlin/core +refs/pull/152/*:refs/remotes/origin/pr/152/* # timeout=10
 > git rev-parse c9eed9da9744321904b5ae99aa325dd02c469c4d^{commit} # timeout=10
Checking out Revision c9eed9da9744321904b5ae99aa325dd02c469c4d (detached)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f c9eed9da9744321904b5ae99aa325dd02c469c4d # timeout=10
Commit message: "necessary changes to allow graph execution in dataloader"
 > git rev-list --no-walk 60084c5e9a56a8dece550155fefdb5509a3eb789 # timeout=10
[merlin_core] $ /bin/bash /tmp/jenkins3718123363908628977.sh
GLOB sdist-make: /var/jenkins_home/workspace/merlin_core/core/setup.py
test-gpu recreate: /var/jenkins_home/workspace/merlin_core/core/.tox/test-gpu
test-gpu installdeps: pytest, pytest-cov
WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration.
test-gpu inst: /var/jenkins_home/workspace/merlin_core/core/.tox/.tmp/package/1/merlin-core-0.7.0+10.gc9eed9d.zip
WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration.
test-gpu installed: absl-py==1.2.0,aiohttp==3.8.1,aiosignal==1.2.0,alabaster==0.7.12,anyio==3.6.1,argon2-cffi==21.3.0,argon2-cffi-bindings==21.2.0,astroid==2.5.6,asttokens==2.0.8,astunparse==1.6.3,asv==0.5.1,asvdb==0.4.2,async-timeout==4.0.2,attrs==22.1.0,awscli==1.25.90,Babel==2.10.3,backcall==0.2.0,beautifulsoup4==4.11.1,betterproto==1.2.5,black==22.6.0,bleach==5.0.1,boto3==1.24.75,botocore==1.27.89,Brotli==1.0.9,cachetools==5.2.0,certifi==2019.11.28,cffi==1.15.1,chardet==3.0.4,charset-normalizer==2.1.1,clang==5.0,click==8.1.3,cloudpickle==2.2.0,cmake==3.24.1.1,colorama==0.4.4,contourpy==1.0.5,coverage==6.5.0,cuda-python==11.7.1,cupy-cuda117==10.6.0,cycler==0.11.0,Cython==0.29.32,dask==2022.1.1,dbus-python==1.2.16,debugpy==1.6.3,decorator==5.1.1,defusedxml==0.7.1,dill==0.3.5.1,distlib==0.3.6,distributed==2022.5.1,distro==1.7.0,dm-tree==0.1.6,docker-pycreds==0.4.0,docutils==0.16,emoji==1.7.0,entrypoints==0.4,execnet==1.9.0,executing==1.0.0,faiss==1.7.2,faiss-gpu==1.7.2,fastai==2.7.9,fastapi==0.85.0,fastavro==1.6.1,fastcore==1.5.27,fastdownload==0.0.7,fastjsonschema==2.16.1,fastprogress==1.0.3,fastrlock==0.8,feast==0.19.4,fiddle==0.2.2,filelock==3.8.0,flatbuffers==1.12,fonttools==4.37.3,frozenlist==1.3.1,fsspec==2022.5.0,gast==0.4.0,gevent==21.12.0,geventhttpclient==2.0.2,gitdb==4.0.9,GitPython==3.1.27,google==3.0.0,google-api-core==2.10.1,google-auth==2.11.1,google-auth-oauthlib==0.4.6,google-pasta==0.2.0,googleapis-common-protos==1.52.0,graphviz==0.20.1,greenlet==1.1.3,grpcio==1.41.0,grpcio-channelz==1.49.0,grpcio-reflection==1.48.1,grpclib==0.4.3,h11==0.13.0,h2==4.1.0,h5py==3.7.0,HeapDict==1.0.1,hpack==4.0.0,httptools==0.5.0,hugectr2onnx==0.0.0,huggingface-hub==0.9.1,hyperframe==6.0.1,idna==2.8,imagesize==1.4.1,implicit==0.6.1,importlib-metadata==4.12.0,importlib-resources==5.9.0,iniconfig==1.1.1,ipykernel==6.15.3,ipython==8.5.0,ipython-genutils==0.2.0,ipywidgets==7.7.0,jedi==0.18.1,Jinja2==3.1.2,jmespath==1.0.1,joblib==1.2.0,json5==0.9.10,jsonschema==4.16.0,jupyter-cache==0.4.3,jupyter-core==4.11.1,jupyter-server==1.18.1,jupyter-server-mathjax==0.2.5,jupyter-sphinx==0.3.2,jupyter_client==7.3.5,jupyterlab==3.4.7,jupyterlab-pygments==0.2.2,jupyterlab-widgets==1.1.0,jupyterlab_server==2.15.1,keras==2.9.0,Keras-Preprocessing==1.1.2,kiwisolver==1.4.4,lazy-object-proxy==1.7.1,libclang==14.0.6,libcst==0.4.7,lightfm==1.16,lightgbm==3.3.2,linkify-it-py==1.0.3,llvmlite==0.39.1,locket==1.0.0,lxml==4.9.1,Markdown==3.4.1,markdown-it-py==1.1.0,MarkupSafe==2.1.1,matplotlib==3.6.0,matplotlib-inline==0.1.6,mdit-py-plugins==0.2.8,merlin-core==0.7.0+10.gc9eed9d,merlin-models==0.7.0+11.g280956aa4,merlin-systems==0.5.0+4.g15074ad,mistune==2.0.4,mmh3==3.0.0,mpi4py==3.1.3,msgpack==1.0.4,multidict==6.0.2,mypy-extensions==0.4.3,myst-nb==0.13.2,myst-parser==0.15.2,natsort==8.1.0,nbclassic==0.4.3,nbclient==0.6.8,nbconvert==7.0.0,nbdime==3.1.1,nbformat==5.5.0,nest-asyncio==1.5.5,ninja==1.10.2.3,notebook==6.4.12,notebook-shim==0.1.0,numba==0.56.2,numpy==1.22.4,nvidia-pyindex==1.0.9,# Editable install with no version control (nvtabular==1.4.0+8.g95e12d347),-e /usr/local/lib/python3.8/dist-packages,nvtx==0.2.5,oauthlib==3.2.1,oldest-supported-numpy==2022.8.16,onnx==1.12.0,onnxruntime==1.11.1,opt-einsum==3.3.0,packaging==21.3,pandas==1.3.5,pandavro==1.5.2,pandocfilters==1.5.0,parso==0.8.3,partd==1.3.0,pathtools==0.1.2,pexpect==4.8.0,pickleshare==0.7.5,Pillow==9.2.0,pkgutil_resolve_name==1.3.10,platformdirs==2.5.2,pluggy==1.0.0,prometheus-client==0.14.1,promise==2.3,prompt-toolkit==3.0.31,proto-plus==1.19.6,protobuf==3.19.5,psutil==5.9.2,ptyprocess==0.7.0,pure-eval==0.2.2,py==1.11.0,pyarrow==7.0.0,pyasn1==0.4.8,pyasn1-modules==0.2.8,pybind11==2.10.0,pycparser==2.21,pydantic==1.10.2,pydot==1.4.2,Pygments==2.13.0,PyGObject==3.36.0,pynvml==11.4.1,pyparsing==3.0.9,pyrsistent==0.18.1,pytest==7.1.3,pytest-cov==4.0.0,pytest-forked==1.4.0,pytest-xdist==2.5.0,python-apt==2.0.0+ubuntu0.20.4.8,python-dateutil==2.8.2,python-dotenv==0.21.0,python-rapidjson==1.8,pytz==2022.2.1,PyYAML==5.4.1,pyzmq==24.0.0,regex==2022.9.13,requests==2.22.0,requests-oauthlib==1.3.1,requests-unixsocket==0.2.0,rsa==4.7.2,s3fs==2022.2.0,s3transfer==0.6.0,sacremoses==0.0.53,scikit-build==0.15.0,scikit-learn==1.1.2,scipy==1.9.1,seedir==0.3.0,Send2Trash==1.8.0,sentry-sdk==1.9.8,setproctitle==1.3.2,setuptools-scm==7.0.5,shortuuid==1.0.9,six==1.15.0,sklearn==0.0,smmap==5.0.0,sniffio==1.3.0,snowballstemmer==2.2.0,sortedcontainers==2.4.0,soupsieve==2.3.2.post1,Sphinx==5.2.3,sphinx-multiversion==0.2.4,sphinx-togglebutton==0.3.1,sphinx_external_toc==0.3.0,sphinxcontrib-applehelp==1.0.2,sphinxcontrib-copydirs @ git+https://github.com/mikemckiernan/sphinxcontrib-copydirs.git@bd8c5d79b3f91cf5f1bb0d6995aeca3fe84b670e,sphinxcontrib-devhelp==1.0.2,sphinxcontrib-htmlhelp==2.0.0,sphinxcontrib-jsmath==1.0.1,sphinxcontrib-qthelp==1.0.3,sphinxcontrib-serializinghtml==1.1.5,SQLAlchemy==1.4.36,stack-data==0.5.0,starlette==0.20.4,stringcase==1.2.0,supervisor==4.1.0,tabulate==0.8.10,tblib==1.7.0,tdqm==0.0.1,tenacity==8.0.1,tensorboard==2.9.1,tensorboard-data-server==0.6.1,tensorboard-plugin-wit==1.8.1,tensorflow==2.6.2,tensorflow-estimator==2.9.0,tensorflow-gpu==2.9.2,tensorflow-io-gcs-filesystem==0.27.0,tensorflow-metadata==1.10.0,termcolor==2.0.1,terminado==0.15.0,testbook==0.4.2,threadpoolctl==3.1.0,tinycss2==1.1.1,tokenizers==0.10.3,toml==0.10.2,tomli==2.0.1,toolz==0.12.0,torch==1.12.1+cu113,torchmetrics==0.3.2,tornado==6.2,tox==3.26.0,tqdm==4.64.1,traitlets==5.4.0,transformers==4.12.0,transformers4rec==0.1.12+2.gbcc939255,treelite==2.3.0,treelite-runtime==2.3.0,tritonclient==2.25.0,typing-inspect==0.8.0,typing_extensions==4.3.0,uc-micro-py==1.0.1,urllib3==1.26.12,uvicorn==0.18.3,uvloop==0.17.0,versioneer==0.20,virtualenv==20.16.5,wandb==0.13.3,watchfiles==0.17.0,wcwidth==0.2.5,webencodings==0.5.1,websocket-client==1.4.1,websockets==10.3,Werkzeug==2.2.2,widgetsnbextension==3.6.0,wrapt==1.12.1,xgboost==1.6.2,yarl==1.8.1,zict==2.2.0,zipp==3.8.1,zope.event==4.5.0,zope.interface==5.4.0
test-gpu run-test-pre: PYTHONHASHSEED='3479278766'
test-gpu run-test: commands[0] | python -m pytest --cov-report term --cov merlin -rxs tests/unit
============================= test session starts ==============================
platform linux -- Python 3.8.10, pytest-7.1.3, pluggy-1.0.0
cachedir: .tox/test-gpu/.pytest_cache
rootdir: /var/jenkins_home/workspace/merlin_core/core, configfile: pyproject.toml
plugins: anyio-3.5.0, xdist-2.5.0, forked-1.4.0, cov-4.0.0
collected 368 items / 1 skipped

tests/unit/core/test_dispatch.py ..                                      [  0%]

tests/unit/core/test_protocols.py .........                              [  2%]

tests/unit/core/test_version.py .                                        [  3%]

tests/unit/dag/test_base_operator.py ....                                [  4%]

tests/unit/dag/test_column_selector.py ..............................    [ 12%]

tests/unit/dag/test_dictarray.py ...                                     [ 13%]

tests/unit/dag/test_executors.py ..                                      [ 13%]

tests/unit/dag/test_graph.py ....                                        [ 14%]

tests/unit/dag/ops/test_selection.py ...                                 [ 15%]

tests/unit/io/test_io.py ............................................... [ 28%]

................................................................         [ 45%]

tests/unit/schema/test_column_schemas.py .......                         [ 47%]

tests/unit/schema/test_schema.py .............                           [ 51%]

tests/unit/schema/test_schema_io.py .................................... [ 61%]

........................................................................ [ 80%]

........................................................                 [ 95%]

tests/unit/schema/test_tags.py .......                                   [ 97%]

tests/unit/utils/test_utils.py ........                                  [100%]


=============================== warnings summary ===============================

tests/unit/io/test_io.py::test_validate_and_regenerate_dataset

/var/jenkins_home/workspace/merlin_core/core/merlin/io/parquet.py:551: DeprecationWarning: 'ParquetDataset.pieces' attribute is deprecated as of pyarrow 5.0.0 and will be removed in a future version. Specify 'use_legacy_dataset=False' while constructing the ParquetDataset, and then use the '.fragments' attribute instead.

paths = [p.path for p in pa_dataset.pieces]


tests/unit/schema/test_column_schemas.py::test_column_schema_tags_normalize

tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.ITEM_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.ITEM: 'item'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_schema_io.py::test_json_serialization_with_embedded_dicts

tests/unit/schema/test_schema_io.py::test_merlin_to_proto_to_json_to_merlin

tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.USER_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.USER: 'user'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.SESSION_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.SESSION: 'session'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.TEXT_TOKENIZED have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.TEXT: 'text'>, <Tags.TOKENIZED: 'tokenized'>].

warnings.warn(


tests/unit/utils/test_utils.py::test_serial_context[True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 34387 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[True-True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 35529 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[True-False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 32985 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[False-True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 34889 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[False-False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 45045 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed_force[True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 40629 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed_force[False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 35433 instead

warnings.warn(


-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html


---------- coverage: platform linux, python 3.8.10-final-0 -----------

Name                                      Stmts   Miss  Cover


merlin/core/init.py                       2      0   100%

merlin/core/_version.py                     354    205    42%

merlin/core/compat.py                        10      4    60%

merlin/core/dispatch.py                     353    214    39%

merlin/core/protocols.py                    100     45    55%

merlin/core/utils.py                        195     56    71%

merlin/dag/init.py                        5      0   100%

merlin/dag/base_operator.py                 122     20    84%

merlin/dag/dictarray.py                      54     15    72%

merlin/dag/executors.py                     127     58    54%

merlin/dag/graph.py                          99     35    65%

merlin/dag/node.py                          344    161    53%

merlin/dag/ops/init.py                    4      0   100%

merlin/dag/ops/concat_columns.py             17      4    76%

merlin/dag/ops/selection.py                  22      1    95%

merlin/dag/ops/subset_columns.py             12      4    67%

merlin/dag/ops/subtraction.py                21     11    48%

merlin/dag/selector.py                      101      6    94%

merlin/io/init.py                         4      0   100%

merlin/io/avro.py                            88     88     0%

merlin/io/csv.py                             57      6    89%

merlin/io/dask.py                           181     53    71%

merlin/io/dataframe_engine.py                61      5    92%

merlin/io/dataframe_iter.py                  21      1    95%

merlin/io/dataset.py                        346     54    84%

merlin/io/dataset_engine.py                  37      8    78%

merlin/io/fsspec_utils.py                   127    108    15%

merlin/io/hugectr.py                         45     35    22%

merlin/io/parquet.py                        603     69    89%

merlin/io/shuffle.py                         38     12    68%

merlin/io/worker.py                          80     66    18%

merlin/io/writer.py                         190     52    73%

merlin/io/writer_factory.py                  18      4    78%

merlin/schema/init.py                     2      0   100%

merlin/schema/io/init.py                  0      0   100%

merlin/schema/io/proto_utils.py              20      4    80%

merlin/schema/io/schema_bp.py               306      5    98%

merlin/schema/io/tensorflow_metadata.py     191     19    90%

merlin/schema/schema.py                     209     33    84%

merlin/schema/tags.py                        82      1    99%


TOTAL                                      4648   1462    69%


=========================== short test summary info ============================

SKIPPED [1] tests/unit/io/test_avro.py:34: could not import 'uavro': No module named 'uavro'

============ 368 passed, 1 skipped, 15 warnings in 64.26s (0:01:04) ============

___________________________________ summary ____________________________________

test-gpu: commands succeeded

congratulations :)

Performing Post build task...

Match found for : : True

Logical operation result is TRUE

Running script  : #!/bin/bash

cd /var/jenkins_home/

CUDA_VISIBLE_DEVICES=1 python test_res_push.py "https://api.GitHub.com/repos/NVIDIA-Merlin/core/issues/$ghprbPullId/comments" "/var/jenkins_home/jobs/$JOB_NAME/builds/$BUILD_NUMBER/log"

[merlin_core] $ /bin/bash /tmp/jenkins1883002412243771420.sh

jperez999
jperez999 commented Oct 13, 2022
View reviewed changes
merlin/dag/executors.py
is_list = is_list_dtype(col_series)

if is_list:
col_dtype = list_val_dtype(col_series)
if hasattr(col_dtype, "as_numpy_dtype"):
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This is where having a "merlin" dtype would have been very helpful. We can avoid this code kludge.

@karlhigley
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@EvenOldridge I think you were telling me that some of the transforms that would have run in the dataloaders are now part of the models, but there are still transforms to run at data-loading time (e.g. merging pre-trained embeddings into the examples.) This is one of the places where we're starting to hit issues with not having Merlin dtypes or cross-framework data transfer. How do you want to handle that? We can move forward with a pile of hacks to work around historically contentious design elements, or we can make decisions about how to build those elements (at least for now, knowing we might—and probably will—continue to iterate on them.)

@nvidia-merlin-bot
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Click to view CI Results
GitHub pull request #152 of commit 5aa3a28f395407705ea73c3d78eb3e35de885134, no merge conflicts.
Running as SYSTEM
Setting status of 5aa3a28f395407705ea73c3d78eb3e35de885134 to PENDING with url https://10.20.13.93:8080/job/merlin_core/259/console and message: 'Pending'
Using context: Jenkins
Building on master in workspace /var/jenkins_home/workspace/merlin_core
using credential ce87ff3c-94f0-400a-8303-cb4acb4918b5
 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/NVIDIA-Merlin/core # timeout=10
Fetching upstream changes from https://github.com/NVIDIA-Merlin/core
 > git --version # timeout=10
using GIT_ASKPASS to set credentials login for merlin-systems username and pass
 > git fetch --tags --force --progress -- https://github.com/NVIDIA-Merlin/core +refs/pull/152/*:refs/remotes/origin/pr/152/* # timeout=10
 > git rev-parse 5aa3a28f395407705ea73c3d78eb3e35de885134^{commit} # timeout=10
Checking out Revision 5aa3a28f395407705ea73c3d78eb3e35de885134 (detached)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 5aa3a28f395407705ea73c3d78eb3e35de885134 # timeout=10
Commit message: "Merge branch 'main' into dl-transforms"
 > git rev-list --no-walk a45bebef090eff73b5f7207204b775d11ec72b1b # timeout=10
[merlin_core] $ /bin/bash /tmp/jenkins17276242056872064373.sh
GLOB sdist-make: /var/jenkins_home/workspace/merlin_core/core/setup.py
test-gpu recreate: /var/jenkins_home/workspace/merlin_core/core/.tox/test-gpu
test-gpu installdeps: pytest, pytest-cov
WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration.
test-gpu inst: /var/jenkins_home/workspace/merlin_core/core/.tox/.tmp/package/1/merlin-core-0.8.0+5.g5aa3a28.zip
WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration.
test-gpu installed: absl-py==1.2.0,aiohttp==3.8.1,aiosignal==1.2.0,alabaster==0.7.12,anyio==3.6.1,argon2-cffi==21.3.0,argon2-cffi-bindings==21.2.0,astroid==2.5.6,asttokens==2.0.8,astunparse==1.6.3,asv==0.5.1,asvdb==0.4.2,async-timeout==4.0.2,attrs==22.1.0,awscli==1.26.0,Babel==2.10.3,backcall==0.2.0,beautifulsoup4==4.11.1,betterproto==1.2.5,black==22.6.0,bleach==5.0.1,boto3==1.24.75,botocore==1.28.0,Brotli==1.0.9,cachetools==5.2.0,certifi==2019.11.28,cffi==1.15.1,chardet==3.0.4,charset-normalizer==2.1.1,clang==5.0,click==8.1.3,cloudpickle==2.2.0,cmake==3.24.1.1,colorama==0.4.4,contourpy==1.0.5,coverage==6.5.0,cuda-python==11.7.1,cupy-cuda117==10.6.0,cycler==0.11.0,Cython==0.29.32,dask==2022.1.1,dbus-python==1.2.16,debugpy==1.6.3,decorator==5.1.1,defusedxml==0.7.1,dill==0.3.5.1,distlib==0.3.6,distributed==2022.5.1,distro==1.7.0,dm-tree==0.1.6,docker-pycreds==0.4.0,docutils==0.16,emoji==1.7.0,entrypoints==0.4,execnet==1.9.0,executing==1.0.0,faiss==1.7.2,faiss-gpu==1.7.2,fastai==2.7.9,fastapi==0.85.0,fastavro==1.6.1,fastcore==1.5.27,fastdownload==0.0.7,fastjsonschema==2.16.1,fastprogress==1.0.3,fastrlock==0.8,feast==0.19.4,fiddle==0.2.2,filelock==3.8.0,flatbuffers==1.12,fonttools==4.37.3,frozenlist==1.3.1,fsspec==2022.5.0,gast==0.4.0,gevent==21.12.0,geventhttpclient==2.0.2,gitdb==4.0.9,GitPython==3.1.27,google==3.0.0,google-api-core==2.10.1,google-auth==2.11.1,google-auth-oauthlib==0.4.6,google-pasta==0.2.0,googleapis-common-protos==1.52.0,graphviz==0.20.1,greenlet==1.1.3,grpcio==1.41.0,grpcio-channelz==1.49.0,grpcio-reflection==1.48.1,grpclib==0.4.3,h11==0.13.0,h2==4.1.0,h5py==3.7.0,HeapDict==1.0.1,hpack==4.0.0,httptools==0.5.0,hugectr2onnx==0.0.0,huggingface-hub==0.9.1,hyperframe==6.0.1,idna==2.8,imagesize==1.4.1,implicit==0.6.1,importlib-metadata==4.12.0,importlib-resources==5.9.0,iniconfig==1.1.1,ipykernel==6.15.3,ipython==8.5.0,ipython-genutils==0.2.0,ipywidgets==7.7.0,jedi==0.18.1,Jinja2==3.1.2,jmespath==1.0.1,joblib==1.2.0,json5==0.9.10,jsonschema==4.16.0,jupyter-cache==0.4.3,jupyter-core==4.11.1,jupyter-server==1.18.1,jupyter-server-mathjax==0.2.5,jupyter-sphinx==0.3.2,jupyter_client==7.3.5,jupyterlab==3.4.7,jupyterlab-pygments==0.2.2,jupyterlab-widgets==1.1.0,jupyterlab_server==2.15.1,keras==2.9.0,Keras-Preprocessing==1.1.2,kiwisolver==1.4.4,lazy-object-proxy==1.7.1,libclang==14.0.6,libcst==0.4.7,lightfm==1.16,lightgbm==3.3.2,linkify-it-py==1.0.3,llvmlite==0.39.1,locket==1.0.0,lxml==4.9.1,Markdown==3.4.1,markdown-it-py==1.1.0,MarkupSafe==2.1.1,matplotlib==3.6.0,matplotlib-inline==0.1.6,mdit-py-plugins==0.2.8,merlin-core==0.8.0+5.g5aa3a28,merlin-models==0.7.0+11.g280956aa4,merlin-systems==0.5.0+4.g15074ad,mistune==2.0.4,mmh3==3.0.0,mpi4py==3.1.3,msgpack==1.0.4,multidict==6.0.2,mypy-extensions==0.4.3,myst-nb==0.13.2,myst-parser==0.15.2,natsort==8.1.0,nbclassic==0.4.3,nbclient==0.6.8,nbconvert==7.0.0,nbdime==3.1.1,nbformat==5.5.0,nest-asyncio==1.5.5,ninja==1.10.2.3,notebook==6.4.12,notebook-shim==0.1.0,numba==0.56.2,numpy==1.22.4,nvidia-pyindex==1.0.9,# Editable install with no version control (nvtabular==1.4.0+8.g95e12d347),-e /usr/local/lib/python3.8/dist-packages,nvtx==0.2.5,oauthlib==3.2.1,oldest-supported-numpy==2022.8.16,onnx==1.12.0,onnxruntime==1.11.1,opt-einsum==3.3.0,packaging==21.3,pandas==1.3.5,pandavro==1.5.2,pandocfilters==1.5.0,parso==0.8.3,partd==1.3.0,pathtools==0.1.2,pexpect==4.8.0,pickleshare==0.7.5,Pillow==9.2.0,pkgutil_resolve_name==1.3.10,platformdirs==2.5.2,pluggy==1.0.0,prometheus-client==0.14.1,promise==2.3,prompt-toolkit==3.0.31,proto-plus==1.19.6,protobuf==3.19.5,psutil==5.9.2,ptyprocess==0.7.0,pure-eval==0.2.2,py==1.11.0,pyarrow==7.0.0,pyasn1==0.4.8,pyasn1-modules==0.2.8,pybind11==2.10.0,pycparser==2.21,pydantic==1.10.2,pydot==1.4.2,Pygments==2.13.0,PyGObject==3.36.0,pynvml==11.4.1,pyparsing==3.0.9,pyrsistent==0.18.1,pytest==7.1.3,pytest-cov==4.0.0,pytest-forked==1.4.0,pytest-xdist==2.5.0,python-apt==2.0.0+ubuntu0.20.4.8,python-dateutil==2.8.2,python-dotenv==0.21.0,python-rapidjson==1.8,pytz==2022.2.1,PyYAML==5.4.1,pyzmq==24.0.0,regex==2022.9.13,requests==2.22.0,requests-oauthlib==1.3.1,requests-unixsocket==0.2.0,rsa==4.7.2,s3fs==2022.2.0,s3transfer==0.6.0,sacremoses==0.0.53,scikit-build==0.15.0,scikit-learn==1.1.2,scipy==1.9.1,seedir==0.3.0,Send2Trash==1.8.0,sentry-sdk==1.9.8,setproctitle==1.3.2,setuptools-scm==7.0.5,shortuuid==1.0.9,six==1.15.0,sklearn==0.0,smmap==5.0.0,sniffio==1.3.0,snowballstemmer==2.2.0,sortedcontainers==2.4.0,soupsieve==2.3.2.post1,Sphinx==5.3.0,sphinx-multiversion==0.2.4,sphinx-togglebutton==0.3.1,sphinx_external_toc==0.3.0,sphinxcontrib-applehelp==1.0.2,sphinxcontrib-copydirs @ git+https://github.com/mikemckiernan/sphinxcontrib-copydirs.git@bd8c5d79b3f91cf5f1bb0d6995aeca3fe84b670e,sphinxcontrib-devhelp==1.0.2,sphinxcontrib-htmlhelp==2.0.0,sphinxcontrib-jsmath==1.0.1,sphinxcontrib-qthelp==1.0.3,sphinxcontrib-serializinghtml==1.1.5,SQLAlchemy==1.4.36,stack-data==0.5.0,starlette==0.20.4,stringcase==1.2.0,supervisor==4.1.0,tabulate==0.8.10,tblib==1.7.0,tdqm==0.0.1,tenacity==8.0.1,tensorboard==2.9.1,tensorboard-data-server==0.6.1,tensorboard-plugin-wit==1.8.1,tensorflow==2.6.2,tensorflow-estimator==2.9.0,tensorflow-gpu==2.9.2,tensorflow-io-gcs-filesystem==0.27.0,tensorflow-metadata==1.10.0,termcolor==2.0.1,terminado==0.15.0,testbook==0.4.2,threadpoolctl==3.1.0,tinycss2==1.1.1,tokenizers==0.10.3,toml==0.10.2,tomli==2.0.1,toolz==0.12.0,torch==1.12.1+cu113,torchmetrics==0.3.2,tornado==6.2,tox==3.26.0,tqdm==4.64.1,traitlets==5.4.0,transformers==4.12.0,transformers4rec==0.1.12+2.gbcc939255,treelite==2.3.0,treelite-runtime==2.3.0,tritonclient==2.25.0,typing-inspect==0.8.0,typing_extensions==4.3.0,uc-micro-py==1.0.1,urllib3==1.26.12,uvicorn==0.18.3,uvloop==0.17.0,versioneer==0.20,virtualenv==20.16.5,wandb==0.13.3,watchfiles==0.17.0,wcwidth==0.2.5,webencodings==0.5.1,websocket-client==1.4.1,websockets==10.3,Werkzeug==2.2.2,widgetsnbextension==3.6.0,wrapt==1.12.1,xgboost==1.6.2,yarl==1.8.1,zict==2.2.0,zipp==3.8.1,zope.event==4.5.0,zope.interface==5.4.0
test-gpu run-test-pre: PYTHONHASHSEED='2501929384'
test-gpu run-test: commands[0] | python -m pytest --cov-report term --cov merlin -rxs tests/unit
============================= test session starts ==============================
platform linux -- Python 3.8.10, pytest-7.1.3, pluggy-1.0.0
cachedir: .tox/test-gpu/.pytest_cache
rootdir: /var/jenkins_home/workspace/merlin_core/core, configfile: pyproject.toml
plugins: anyio-3.5.0, xdist-2.5.0, forked-1.4.0, cov-4.0.0
collected 368 items / 1 skipped

tests/unit/core/test_dispatch.py ..                                      [  0%]

tests/unit/core/test_protocols.py .........                              [  2%]

tests/unit/core/test_version.py .                                        [  3%]

tests/unit/dag/test_base_operator.py ....                                [  4%]

tests/unit/dag/test_column_selector.py ..............................    [ 12%]

tests/unit/dag/test_dictarray.py ...                                     [ 13%]

tests/unit/dag/test_executors.py ..                                      [ 13%]

tests/unit/dag/test_graph.py ....                                        [ 14%]

tests/unit/dag/ops/test_selection.py ...                                 [ 15%]

tests/unit/io/test_io.py ............................................... [ 28%]

................................................................         [ 45%]

tests/unit/schema/test_column_schemas.py .......                         [ 47%]

tests/unit/schema/test_schema.py .............                           [ 51%]

tests/unit/schema/test_schema_io.py .................................... [ 61%]

........................................................................ [ 80%]

........................................................                 [ 95%]

tests/unit/schema/test_tags.py .......                                   [ 97%]

tests/unit/utils/test_utils.py ........                                  [100%]


=============================== warnings summary ===============================

tests/unit/io/test_io.py::test_validate_and_regenerate_dataset

/var/jenkins_home/workspace/merlin_core/core/merlin/io/parquet.py:551: DeprecationWarning: 'ParquetDataset.pieces' attribute is deprecated as of pyarrow 5.0.0 and will be removed in a future version. Specify 'use_legacy_dataset=False' while constructing the ParquetDataset, and then use the '.fragments' attribute instead.

paths = [p.path for p in pa_dataset.pieces]


tests/unit/schema/test_column_schemas.py::test_column_schema_tags_normalize

tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.ITEM_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.ITEM: 'item'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_schema_io.py::test_json_serialization_with_embedded_dicts

tests/unit/schema/test_schema_io.py::test_merlin_to_proto_to_json_to_merlin

tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.USER_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.USER: 'user'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.SESSION_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.SESSION: 'session'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.TEXT_TOKENIZED have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.TEXT: 'text'>, <Tags.TOKENIZED: 'tokenized'>].

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[True-True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 35605 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[True-False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 43775 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[False-True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 33647 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[False-False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 43247 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed_force[True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 44911 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed_force[False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 36475 instead

warnings.warn(


-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html


---------- coverage: platform linux, python 3.8.10-final-0 -----------

Name                                      Stmts   Miss  Cover


merlin/core/init.py                       2      0   100%

merlin/core/_version.py                     354    205    42%

merlin/core/compat.py                        10      4    60%

merlin/core/dispatch.py                     355    215    39%

merlin/core/protocols.py                    100     45    55%

merlin/core/utils.py                        195     56    71%

merlin/dag/init.py                        5      0   100%

merlin/dag/base_operator.py                 122     20    84%

merlin/dag/dictarray.py                      54     15    72%

merlin/dag/executors.py                     127     58    54%

merlin/dag/graph.py                          99     35    65%

merlin/dag/node.py                          344    161    53%

merlin/dag/ops/init.py                    4      0   100%

merlin/dag/ops/concat_columns.py             17      4    76%

merlin/dag/ops/selection.py                  22      1    95%

merlin/dag/ops/subset_columns.py             12      4    67%

merlin/dag/ops/subtraction.py                21     11    48%

merlin/dag/selector.py                      101      6    94%

merlin/io/init.py                         4      0   100%

merlin/io/avro.py                            88     88     0%

merlin/io/csv.py                             57      6    89%

merlin/io/dask.py                           181     53    71%

merlin/io/dataframe_engine.py                61      5    92%

merlin/io/dataframe_iter.py                  21      1    95%

merlin/io/dataset.py                        346     54    84%

merlin/io/dataset_engine.py                  37      8    78%

merlin/io/fsspec_utils.py                   127    108    15%

merlin/io/hugectr.py                         45     35    22%

merlin/io/parquet.py                        603     69    89%

merlin/io/shuffle.py                         38     12    68%

merlin/io/worker.py                          80     66    18%

merlin/io/writer.py                         190     52    73%

merlin/io/writer_factory.py                  18      4    78%

merlin/schema/init.py                     2      0   100%

merlin/schema/io/init.py                  0      0   100%

merlin/schema/io/proto_utils.py              20      4    80%

merlin/schema/io/schema_bp.py               306      5    98%

merlin/schema/io/tensorflow_metadata.py     190     18    91%

merlin/schema/schema.py                     209     33    84%

merlin/schema/tags.py                        82      1    99%


TOTAL                                      4649   1462    69%


=========================== short test summary info ============================

SKIPPED [1] tests/unit/io/test_avro.py:34: could not import 'uavro': No module named 'uavro'

============ 368 passed, 1 skipped, 14 warnings in 62.95s (0:01:02) ============

___________________________________ summary ____________________________________

test-gpu: commands succeeded

congratulations :)

Performing Post build task...

Match found for : : True

Logical operation result is TRUE

Running script  : #!/bin/bash

cd /var/jenkins_home/

CUDA_VISIBLE_DEVICES=1 python test_res_push.py "https://api.GitHub.com/repos/NVIDIA-Merlin/core/issues/$ghprbPullId/comments" "/var/jenkins_home/jobs/$JOB_NAME/builds/$BUILD_NUMBER/log"

[merlin_core] $ /bin/bash /tmp/jenkins1341285805599399363.sh

@nvidia-merlin-bot
Copy link

Click to view CI Results
GitHub pull request #152 of commit e4ad15e27df296b67940b1fb15f035711f0ef59e, no merge conflicts.
Running as SYSTEM
Setting status of e4ad15e27df296b67940b1fb15f035711f0ef59e to PENDING with url https://10.20.13.93:8080/job/merlin_core/260/console and message: 'Pending'
Using context: Jenkins
Building on master in workspace /var/jenkins_home/workspace/merlin_core
using credential ce87ff3c-94f0-400a-8303-cb4acb4918b5
 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/NVIDIA-Merlin/core # timeout=10
Fetching upstream changes from https://github.com/NVIDIA-Merlin/core
 > git --version # timeout=10
using GIT_ASKPASS to set credentials login for merlin-systems username and pass
 > git fetch --tags --force --progress -- https://github.com/NVIDIA-Merlin/core +refs/pull/152/*:refs/remotes/origin/pr/152/* # timeout=10
 > git rev-parse e4ad15e27df296b67940b1fb15f035711f0ef59e^{commit} # timeout=10
Checking out Revision e4ad15e27df296b67940b1fb15f035711f0ef59e (detached)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f e4ad15e27df296b67940b1fb15f035711f0ef59e # timeout=10
Commit message: "added test for wildcard, removed comments, refactored ternary"
 > git rev-list --no-walk 5aa3a28f395407705ea73c3d78eb3e35de885134 # timeout=10
[merlin_core] $ /bin/bash /tmp/jenkins11603503828176830264.sh
GLOB sdist-make: /var/jenkins_home/workspace/merlin_core/core/setup.py
test-gpu recreate: /var/jenkins_home/workspace/merlin_core/core/.tox/test-gpu
test-gpu installdeps: pytest, pytest-cov
WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration.
test-gpu inst: /var/jenkins_home/workspace/merlin_core/core/.tox/.tmp/package/1/merlin-core-0.8.0+6.ge4ad15e.zip
WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration.
test-gpu installed: absl-py==1.2.0,aiohttp==3.8.1,aiosignal==1.2.0,alabaster==0.7.12,anyio==3.6.1,argon2-cffi==21.3.0,argon2-cffi-bindings==21.2.0,astroid==2.5.6,asttokens==2.0.8,astunparse==1.6.3,asv==0.5.1,asvdb==0.4.2,async-timeout==4.0.2,attrs==22.1.0,awscli==1.26.0,Babel==2.10.3,backcall==0.2.0,beautifulsoup4==4.11.1,betterproto==1.2.5,black==22.6.0,bleach==5.0.1,boto3==1.24.75,botocore==1.28.0,Brotli==1.0.9,cachetools==5.2.0,certifi==2019.11.28,cffi==1.15.1,chardet==3.0.4,charset-normalizer==2.1.1,clang==5.0,click==8.1.3,cloudpickle==2.2.0,cmake==3.24.1.1,colorama==0.4.4,contourpy==1.0.5,coverage==6.5.0,cuda-python==11.7.1,cupy-cuda117==10.6.0,cycler==0.11.0,Cython==0.29.32,dask==2022.1.1,dbus-python==1.2.16,debugpy==1.6.3,decorator==5.1.1,defusedxml==0.7.1,dill==0.3.5.1,distlib==0.3.6,distributed==2022.5.1,distro==1.7.0,dm-tree==0.1.6,docker-pycreds==0.4.0,docutils==0.16,emoji==1.7.0,entrypoints==0.4,execnet==1.9.0,executing==1.0.0,faiss==1.7.2,faiss-gpu==1.7.2,fastai==2.7.9,fastapi==0.85.0,fastavro==1.6.1,fastcore==1.5.27,fastdownload==0.0.7,fastjsonschema==2.16.1,fastprogress==1.0.3,fastrlock==0.8,feast==0.19.4,fiddle==0.2.2,filelock==3.8.0,flatbuffers==1.12,fonttools==4.37.3,frozenlist==1.3.1,fsspec==2022.5.0,gast==0.4.0,gevent==21.12.0,geventhttpclient==2.0.2,gitdb==4.0.9,GitPython==3.1.27,google==3.0.0,google-api-core==2.10.1,google-auth==2.11.1,google-auth-oauthlib==0.4.6,google-pasta==0.2.0,googleapis-common-protos==1.52.0,graphviz==0.20.1,greenlet==1.1.3,grpcio==1.41.0,grpcio-channelz==1.49.0,grpcio-reflection==1.48.1,grpclib==0.4.3,h11==0.13.0,h2==4.1.0,h5py==3.7.0,HeapDict==1.0.1,horovod==0.26.1,hpack==4.0.0,httptools==0.5.0,hugectr2onnx==0.0.0,huggingface-hub==0.9.1,hyperframe==6.0.1,idna==2.8,imagesize==1.4.1,implicit==0.6.1,importlib-metadata==4.12.0,importlib-resources==5.9.0,iniconfig==1.1.1,ipykernel==6.15.3,ipython==8.5.0,ipython-genutils==0.2.0,ipywidgets==7.7.0,jedi==0.18.1,Jinja2==3.1.2,jmespath==1.0.1,joblib==1.2.0,json5==0.9.10,jsonschema==4.16.0,jupyter-cache==0.4.3,jupyter-core==4.11.1,jupyter-server==1.18.1,jupyter-server-mathjax==0.2.5,jupyter-sphinx==0.3.2,jupyter_client==7.3.5,jupyterlab==3.4.7,jupyterlab-pygments==0.2.2,jupyterlab-widgets==1.1.0,jupyterlab_server==2.15.1,keras==2.6.0,Keras-Preprocessing==1.1.2,kiwisolver==1.4.4,lazy-object-proxy==1.7.1,libclang==14.0.6,libcst==0.4.7,lightfm==1.16,lightgbm==3.3.2,linkify-it-py==1.0.3,llvmlite==0.39.1,locket==1.0.0,lxml==4.9.1,Markdown==3.4.1,markdown-it-py==1.1.0,MarkupSafe==2.1.1,matplotlib==3.6.0,matplotlib-inline==0.1.6,mdit-py-plugins==0.2.8,merlin-core==0.8.0+6.ge4ad15e,merlin-models==0.7.0+11.g280956aa4,merlin-systems==0.5.0+4.g15074ad,mistune==2.0.4,mmh3==3.0.0,mpi4py==3.1.3,msgpack==1.0.4,multidict==6.0.2,mypy-extensions==0.4.3,myst-nb==0.13.2,myst-parser==0.15.2,natsort==8.1.0,nbclassic==0.4.3,nbclient==0.6.8,nbconvert==7.0.0,nbdime==3.1.1,nbformat==5.5.0,nest-asyncio==1.5.5,ninja==1.10.2.3,notebook==6.4.12,notebook-shim==0.1.0,numba==0.56.2,numpy==1.22.4,nvidia-pyindex==1.0.9,# Editable install with no version control (nvtabular==1.4.0+8.g95e12d347),-e /usr/local/lib/python3.8/dist-packages,nvtx==0.2.5,oauthlib==3.2.1,oldest-supported-numpy==2022.8.16,onnx==1.12.0,onnxruntime==1.11.1,opt-einsum==3.3.0,packaging==21.3,pandas==1.3.5,pandavro==1.5.2,pandocfilters==1.5.0,parso==0.8.3,partd==1.3.0,pathtools==0.1.2,pexpect==4.8.0,pickleshare==0.7.5,Pillow==9.2.0,pkgutil_resolve_name==1.3.10,platformdirs==2.5.2,pluggy==1.0.0,prometheus-client==0.14.1,promise==2.3,prompt-toolkit==3.0.31,proto-plus==1.19.6,protobuf==3.19.5,psutil==5.9.2,ptyprocess==0.7.0,pure-eval==0.2.2,py==1.11.0,pyarrow==7.0.0,pyasn1==0.4.8,pyasn1-modules==0.2.8,pybind11==2.10.0,pycparser==2.21,pydantic==1.10.2,pydot==1.4.2,Pygments==2.13.0,PyGObject==3.36.0,pynvml==11.4.1,pyparsing==3.0.9,pyrsistent==0.18.1,pytest==7.1.3,pytest-cov==4.0.0,pytest-forked==1.4.0,pytest-xdist==2.5.0,python-apt==2.0.0+ubuntu0.20.4.8,python-dateutil==2.8.2,python-dotenv==0.21.0,python-rapidjson==1.8,pytz==2022.2.1,PyYAML==5.4.1,pyzmq==24.0.0,regex==2022.9.13,requests==2.22.0,requests-oauthlib==1.3.1,requests-unixsocket==0.2.0,rsa==4.7.2,s3fs==2022.2.0,s3transfer==0.6.0,sacremoses==0.0.53,scikit-build==0.15.0,scikit-learn==1.1.2,scipy==1.9.1,seedir==0.3.0,Send2Trash==1.8.0,sentry-sdk==1.9.8,setproctitle==1.3.2,setuptools-scm==7.0.5,shortuuid==1.0.9,six==1.15.0,sklearn==0.0,smmap==5.0.0,sniffio==1.3.0,snowballstemmer==2.2.0,sortedcontainers==2.4.0,soupsieve==2.3.2.post1,Sphinx==5.3.0,sphinx-multiversion==0.2.4,sphinx-togglebutton==0.3.1,sphinx_external_toc==0.3.0,sphinxcontrib-applehelp==1.0.2,sphinxcontrib-copydirs @ git+https://github.com/mikemckiernan/sphinxcontrib-copydirs.git@bd8c5d79b3f91cf5f1bb0d6995aeca3fe84b670e,sphinxcontrib-devhelp==1.0.2,sphinxcontrib-htmlhelp==2.0.0,sphinxcontrib-jsmath==1.0.1,sphinxcontrib-qthelp==1.0.3,sphinxcontrib-serializinghtml==1.1.5,SQLAlchemy==1.4.36,stack-data==0.5.0,starlette==0.20.4,stringcase==1.2.0,supervisor==4.1.0,tabulate==0.8.10,tblib==1.7.0,tdqm==0.0.1,tenacity==8.0.1,tensorboard==2.9.1,tensorboard-data-server==0.6.1,tensorboard-plugin-wit==1.8.1,tensorflow==2.9.2,tensorflow-estimator==2.6.0,tensorflow-gpu==2.9.2,tensorflow-io-gcs-filesystem==0.27.0,tensorflow-metadata==1.10.0,termcolor==1.1.0,terminado==0.15.0,testbook==0.4.2,threadpoolctl==3.1.0,tinycss2==1.1.1,tokenizers==0.10.3,toml==0.10.2,tomli==2.0.1,toolz==0.12.0,torch==1.12.1+cu113,torchmetrics==0.3.2,tornado==6.2,tox==3.26.0,tqdm==4.64.1,traitlets==5.4.0,transformers==4.12.0,transformers4rec==0.1.12+2.gbcc939255,treelite==2.3.0,treelite-runtime==2.3.0,tritonclient==2.25.0,typing-extensions==3.7.4.3,typing-inspect==0.8.0,uc-micro-py==1.0.1,urllib3==1.26.12,uvicorn==0.18.3,uvloop==0.17.0,versioneer==0.20,virtualenv==20.16.5,wandb==0.13.3,watchfiles==0.17.0,wcwidth==0.2.5,webencodings==0.5.1,websocket-client==1.4.1,websockets==10.3,Werkzeug==2.2.2,widgetsnbextension==3.6.0,wrapt==1.12.1,xgboost==1.6.2,yarl==1.8.1,zict==2.2.0,zipp==3.8.1,zope.event==4.5.0,zope.interface==5.4.0
test-gpu run-test-pre: PYTHONHASHSEED='4173748908'
test-gpu run-test: commands[0] | python -m pytest --cov-report term --cov merlin -rxs tests/unit
============================= test session starts ==============================
platform linux -- Python 3.8.10, pytest-7.1.3, pluggy-1.0.0
cachedir: .tox/test-gpu/.pytest_cache
rootdir: /var/jenkins_home/workspace/merlin_core/core, configfile: pyproject.toml
plugins: anyio-3.5.0, xdist-2.5.0, forked-1.4.0, cov-4.0.0
collected 369 items / 1 skipped

tests/unit/core/test_dispatch.py ..                                      [  0%]

tests/unit/core/test_protocols.py .........                              [  2%]

tests/unit/core/test_version.py .                                        [  3%]

tests/unit/dag/test_base_operator.py ....                                [  4%]

tests/unit/dag/test_column_selector.py ..............................    [ 12%]

tests/unit/dag/test_dictarray.py ...                                     [ 13%]

tests/unit/dag/test_executors.py ..                                      [ 13%]

tests/unit/dag/test_graph.py ....                                        [ 14%]

tests/unit/dag/ops/test_selection.py ....                                [ 15%]

tests/unit/io/test_io.py ............................................... [ 28%]

................................................................         [ 46%]

tests/unit/schema/test_column_schemas.py .......                         [ 47%]

tests/unit/schema/test_schema.py .............                           [ 51%]

tests/unit/schema/test_schema_io.py .................................... [ 61%]

........................................................................ [ 80%]

........................................................                 [ 95%]

tests/unit/schema/test_tags.py .......                                   [ 97%]

tests/unit/utils/test_utils.py ........                                  [100%]


=============================== warnings summary ===============================

tests/unit/io/test_io.py::test_validate_and_regenerate_dataset

/var/jenkins_home/workspace/merlin_core/core/merlin/io/parquet.py:551: DeprecationWarning: 'ParquetDataset.pieces' attribute is deprecated as of pyarrow 5.0.0 and will be removed in a future version. Specify 'use_legacy_dataset=False' while constructing the ParquetDataset, and then use the '.fragments' attribute instead.

paths = [p.path for p in pa_dataset.pieces]


tests/unit/schema/test_column_schemas.py::test_column_schema_tags_normalize

tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.ITEM_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.ITEM: 'item'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_schema_io.py::test_json_serialization_with_embedded_dicts

tests/unit/schema/test_schema_io.py::test_merlin_to_proto_to_json_to_merlin

tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.USER_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.USER: 'user'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.SESSION_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.SESSION: 'session'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.TEXT_TOKENIZED have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.TEXT: 'text'>, <Tags.TOKENIZED: 'tokenized'>].

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[True-True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 44119 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[True-False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 38659 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[False-True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 34849 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[False-False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 39367 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed_force[True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 36625 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed_force[False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 39791 instead

warnings.warn(


-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html


---------- coverage: platform linux, python 3.8.10-final-0 -----------

Name                                      Stmts   Miss  Cover


merlin/core/init.py                       2      0   100%

merlin/core/_version.py                     354    205    42%

merlin/core/compat.py                        10      4    60%

merlin/core/dispatch.py                     355    215    39%

merlin/core/protocols.py                    100     45    55%

merlin/core/utils.py                        195     56    71%

merlin/dag/init.py                        5      0   100%

merlin/dag/base_operator.py                 122     20    84%

merlin/dag/dictarray.py                      54     15    72%

merlin/dag/executors.py                     125     57    54%

merlin/dag/graph.py                          99     35    65%

merlin/dag/node.py                          344    161    53%

merlin/dag/ops/init.py                    4      0   100%

merlin/dag/ops/concat_columns.py             17      4    76%

merlin/dag/ops/selection.py                  22      0   100%

merlin/dag/ops/subset_columns.py             12      4    67%

merlin/dag/ops/subtraction.py                21     11    48%

merlin/dag/selector.py                      101      6    94%

merlin/io/init.py                         4      0   100%

merlin/io/avro.py                            88     88     0%

merlin/io/csv.py                             57      6    89%

merlin/io/dask.py                           181     53    71%

merlin/io/dataframe_engine.py                61      5    92%

merlin/io/dataframe_iter.py                  21      1    95%

merlin/io/dataset.py                        346     54    84%

merlin/io/dataset_engine.py                  37      8    78%

merlin/io/fsspec_utils.py                   127    108    15%

merlin/io/hugectr.py                         45     35    22%

merlin/io/parquet.py                        603     69    89%

merlin/io/shuffle.py                         38     12    68%

merlin/io/worker.py                          80     66    18%

merlin/io/writer.py                         190     52    73%

merlin/io/writer_factory.py                  18      4    78%

merlin/schema/init.py                     2      0   100%

merlin/schema/io/init.py                  0      0   100%

merlin/schema/io/proto_utils.py              20      4    80%

merlin/schema/io/schema_bp.py               306      5    98%

merlin/schema/io/tensorflow_metadata.py     190     18    91%

merlin/schema/schema.py                     209     33    84%

merlin/schema/tags.py                        82      1    99%


TOTAL                                      4647   1460    69%


=========================== short test summary info ============================

SKIPPED [1] tests/unit/io/test_avro.py:34: could not import 'uavro': No module named 'uavro'

============ 369 passed, 1 skipped, 14 warnings in 65.06s (0:01:05) ============

___________________________________ summary ____________________________________

test-gpu: commands succeeded

congratulations :)

Performing Post build task...

Match found for : : True

Logical operation result is TRUE

Running script  : #!/bin/bash

cd /var/jenkins_home/

CUDA_VISIBLE_DEVICES=1 python test_res_push.py "https://api.GitHub.com/repos/NVIDIA-Merlin/core/issues/$ghprbPullId/comments" "/var/jenkins_home/jobs/$JOB_NAME/builds/$BUILD_NUMBER/log"

[merlin_core] $ /bin/bash /tmp/jenkins17416950592381051796.sh

@nvidia-merlin-bot
Copy link

Click to view CI Results
GitHub pull request #152 of commit f0c2f1aa95fbdab93dee5206abf62ae84ed4a75a, no merge conflicts.
Running as SYSTEM
Setting status of f0c2f1aa95fbdab93dee5206abf62ae84ed4a75a to PENDING with url https://10.20.13.93:8080/job/merlin_core/262/console and message: 'Pending'
Using context: Jenkins
Building on master in workspace /var/jenkins_home/workspace/merlin_core
using credential ce87ff3c-94f0-400a-8303-cb4acb4918b5
 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/NVIDIA-Merlin/core # timeout=10
Fetching upstream changes from https://github.com/NVIDIA-Merlin/core
 > git --version # timeout=10
using GIT_ASKPASS to set credentials login for merlin-systems username and pass
 > git fetch --tags --force --progress -- https://github.com/NVIDIA-Merlin/core +refs/pull/152/*:refs/remotes/origin/pr/152/* # timeout=10
 > git rev-parse f0c2f1aa95fbdab93dee5206abf62ae84ed4a75a^{commit} # timeout=10
Checking out Revision f0c2f1aa95fbdab93dee5206abf62ae84ed4a75a (detached)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f0c2f1aa95fbdab93dee5206abf62ae84ed4a75a # timeout=10
Commit message: "Merge branch 'main' into dl-transforms"
 > git rev-list --no-walk 89a7590b74aa02d90ae03aec6527565e00b79068 # timeout=10
[merlin_core] $ /bin/bash /tmp/jenkins5941296460000588181.sh
GLOB sdist-make: /var/jenkins_home/workspace/merlin_core/core/setup.py
test-gpu recreate: /var/jenkins_home/workspace/merlin_core/core/.tox/test-gpu
test-gpu installdeps: pytest, pytest-cov
WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration.
test-gpu inst: /var/jenkins_home/workspace/merlin_core/core/.tox/.tmp/package/1/merlin-core-0.8.0+8.gf0c2f1a.zip
WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration.
test-gpu installed: absl-py==1.2.0,aiohttp==3.8.1,aiosignal==1.2.0,alabaster==0.7.12,alembic==1.8.1,anyio==3.6.1,argon2-cffi==21.3.0,argon2-cffi-bindings==21.2.0,astroid==2.5.6,asttokens==2.0.8,astunparse==1.6.3,asv==0.5.1,asvdb==0.4.2,async-timeout==4.0.2,attrs==22.1.0,autopage==0.5.1,awscli==1.26.3,Babel==2.10.3,backcall==0.2.0,beautifulsoup4==4.11.1,betterproto==1.2.5,black==22.6.0,bleach==5.0.1,boto3==1.24.75,botocore==1.28.3,Brotli==1.0.9,cachetools==5.2.0,certifi==2019.11.28,cffi==1.15.1,chardet==3.0.4,charset-normalizer==2.1.1,clang==5.0,click==8.1.3,cliff==4.0.0,cloudpickle==2.2.0,cmaes==0.8.2,cmake==3.24.1.1,cmd2==2.4.2,colorama==0.4.4,colorlog==6.7.0,contourpy==1.0.5,coverage==6.5.0,cuda-python==11.7.1,cupy-cuda117==10.6.0,cycler==0.11.0,Cython==0.29.32,dask==2022.1.1,dbus-python==1.2.16,debugpy==1.6.3,decorator==5.1.1,defusedxml==0.7.1,dill==0.3.5.1,distlib==0.3.6,distributed==2022.5.1,distro==1.7.0,dm-tree==0.1.6,docker-pycreds==0.4.0,docutils==0.16,emoji==1.7.0,entrypoints==0.4,execnet==1.9.0,executing==1.0.0,faiss==1.7.2,faiss-gpu==1.7.2,fastai==2.7.9,fastapi==0.85.0,fastavro==1.6.1,fastcore==1.5.27,fastdownload==0.0.7,fastjsonschema==2.16.1,fastprogress==1.0.3,fastrlock==0.8,feast==0.19.4,fiddle==0.2.2,filelock==3.8.0,flatbuffers==1.12,fonttools==4.37.3,frozenlist==1.3.1,fsspec==2022.5.0,gast==0.4.0,gevent==21.12.0,geventhttpclient==2.0.2,gitdb==4.0.9,GitPython==3.1.27,google==3.0.0,google-api-core==2.10.1,google-auth==2.11.1,google-auth-oauthlib==0.4.6,google-pasta==0.2.0,googleapis-common-protos==1.52.0,graphviz==0.20.1,greenlet==1.1.3,grpcio==1.41.0,grpcio-channelz==1.49.0,grpcio-reflection==1.48.1,grpclib==0.4.3,h11==0.13.0,h2==4.1.0,h5py==3.7.0,HeapDict==1.0.1,horovod==0.26.1,hpack==4.0.0,httptools==0.5.0,hugectr2onnx==0.0.0,huggingface-hub==0.9.1,hyperframe==6.0.1,idna==2.8,imagesize==1.4.1,implicit==0.6.1,importlib-metadata==4.12.0,importlib-resources==5.9.0,iniconfig==1.1.1,ipykernel==6.15.3,ipython==8.5.0,ipython-genutils==0.2.0,ipywidgets==7.7.0,jedi==0.18.1,Jinja2==3.1.2,jmespath==1.0.1,joblib==1.2.0,json5==0.9.10,jsonschema==4.16.0,jupyter-cache==0.4.3,jupyter-core==4.11.1,jupyter-server==1.18.1,jupyter-server-mathjax==0.2.5,jupyter-sphinx==0.3.2,jupyter_client==7.3.5,jupyterlab==3.4.7,jupyterlab-pygments==0.2.2,jupyterlab-widgets==1.1.0,jupyterlab_server==2.15.1,keras==2.9.0,Keras-Preprocessing==1.1.2,kiwisolver==1.4.4,lazy-object-proxy==1.8.0,libclang==14.0.6,libcst==0.4.7,lightfm==1.16,lightgbm==3.3.2,linkify-it-py==1.0.3,llvmlite==0.39.1,locket==1.0.0,lxml==4.9.1,Mako==1.2.3,Markdown==3.4.1,markdown-it-py==1.1.0,MarkupSafe==2.1.1,matplotlib==3.6.0,matplotlib-inline==0.1.6,mdit-py-plugins==0.2.8,merlin-core==0.8.0+8.gf0c2f1a,merlin-models==0.7.0+11.g280956aa4,merlin-systems==0.5.0+4.g15074ad,mistune==2.0.4,mmh3==3.0.0,mpi4py==3.1.3,msgpack==1.0.4,multidict==6.0.2,mypy-extensions==0.4.3,myst-nb==0.13.2,myst-parser==0.15.2,natsort==8.1.0,nbclassic==0.4.3,nbclient==0.6.8,nbconvert==7.0.0,nbdime==3.1.1,nbformat==5.5.0,nest-asyncio==1.5.5,ninja==1.10.2.3,notebook==6.4.12,notebook-shim==0.1.0,numba==0.56.2,numpy==1.22.4,nvidia-pyindex==1.0.9,# Editable install with no version control (nvtabular==1.4.0+8.g95e12d347),-e /usr/local/lib/python3.8/dist-packages,nvtx==0.2.5,oauthlib==3.2.1,oldest-supported-numpy==2022.8.16,onnx==1.12.0,onnxruntime==1.11.1,opt-einsum==3.3.0,optuna==3.0.3,packaging==21.3,pandas==1.3.5,pandavro==1.5.2,pandocfilters==1.5.0,parso==0.8.3,partd==1.3.0,pathtools==0.1.2,pbr==5.11.0,pexpect==4.8.0,pickleshare==0.7.5,Pillow==9.2.0,pkgutil_resolve_name==1.3.10,platformdirs==2.5.2,plotly==5.11.0,pluggy==1.0.0,prettytable==3.4.1,prometheus-client==0.14.1,promise==2.3,prompt-toolkit==3.0.31,proto-plus==1.19.6,protobuf==3.19.5,psutil==5.9.2,ptyprocess==0.7.0,pure-eval==0.2.2,py==1.11.0,pyarrow==7.0.0,pyasn1==0.4.8,pyasn1-modules==0.2.8,pybind11==2.10.0,pycparser==2.21,pydantic==1.10.2,pydot==1.4.2,Pygments==2.13.0,PyGObject==3.36.0,pynvml==11.4.1,pyparsing==3.0.9,pyperclip==1.8.2,pyrsistent==0.18.1,pytest==7.1.3,pytest-cov==4.0.0,pytest-xdist==3.0.2,python-apt==2.0.0+ubuntu0.20.4.8,python-dateutil==2.8.2,python-dotenv==0.21.0,python-rapidjson==1.8,pytz==2022.2.1,PyYAML==5.4.1,pyzmq==24.0.0,regex==2022.9.13,requests==2.22.0,requests-oauthlib==1.3.1,requests-unixsocket==0.2.0,rsa==4.7.2,s3fs==2022.2.0,s3transfer==0.6.0,sacremoses==0.0.53,scikit-build==0.15.0,scikit-learn==1.1.2,scipy==1.8.1,seedir==0.3.0,Send2Trash==1.8.0,sentry-sdk==1.9.8,setproctitle==1.3.2,setuptools-scm==7.0.5,shortuuid==1.0.9,six==1.15.0,sklearn==0.0,smmap==5.0.0,sniffio==1.3.0,snowballstemmer==2.2.0,sortedcontainers==2.4.0,soupsieve==2.3.2.post1,Sphinx==5.3.0,sphinx-multiversion==0.2.4,sphinx-togglebutton==0.3.1,sphinx_external_toc==0.3.0,sphinxcontrib-applehelp==1.0.2,sphinxcontrib-copydirs @ git+https://github.com/mikemckiernan/sphinxcontrib-copydirs.git@bd8c5d79b3f91cf5f1bb0d6995aeca3fe84b670e,sphinxcontrib-devhelp==1.0.2,sphinxcontrib-htmlhelp==2.0.0,sphinxcontrib-jsmath==1.0.1,sphinxcontrib-qthelp==1.0.3,sphinxcontrib-serializinghtml==1.1.5,SQLAlchemy==1.4.42,stack-data==0.5.0,starlette==0.20.4,stevedore==4.1.0,stringcase==1.2.0,supervisor==4.1.0,tabulate==0.8.10,tblib==1.7.0,tdqm==0.0.1,tenacity==8.0.1,tensorboard==2.9.1,tensorboard-data-server==0.6.1,tensorboard-plugin-wit==1.8.1,tensorflow==2.9.2,tensorflow-estimator==2.9.0,tensorflow-gpu==2.9.2,tensorflow-io-gcs-filesystem==0.27.0,tensorflow-metadata==1.10.0,termcolor==2.0.1,terminado==0.15.0,testbook==0.4.2,threadpoolctl==3.1.0,tinycss2==1.1.1,tokenizers==0.10.3,toml==0.10.2,tomli==2.0.1,toolz==0.12.0,torch==1.12.1+cu113,torchmetrics==0.3.2,tornado==6.2,tox==3.26.0,tqdm==4.64.1,traitlets==5.4.0,transformers==4.12.0,transformers4rec==0.1.12+2.gbcc939255,treelite==2.3.0,treelite-runtime==2.3.0,tritonclient==2.25.0,typing-inspect==0.8.0,typing_extensions==4.3.0,uc-micro-py==1.0.1,urllib3==1.26.12,uvicorn==0.18.3,uvloop==0.17.0,versioneer==0.20,virtualenv==20.16.5,wandb==0.13.3,watchfiles==0.17.0,wcwidth==0.2.5,webencodings==0.5.1,websocket-client==1.4.1,websockets==10.3,Werkzeug==2.2.2,widgetsnbextension==3.6.0,wrapt==1.12.1,xgboost==1.6.2,yarl==1.8.1,zict==2.2.0,zipp==3.8.1,zope.event==4.5.0,zope.interface==5.4.0
test-gpu run-test-pre: PYTHONHASHSEED='242864141'
test-gpu run-test: commands[0] | python -m pytest --cov-report term --cov merlin -rxs tests/unit
============================= test session starts ==============================
platform linux -- Python 3.8.10, pytest-7.1.3, pluggy-1.0.0
cachedir: .tox/test-gpu/.pytest_cache
rootdir: /var/jenkins_home/workspace/merlin_core/core, configfile: pyproject.toml
plugins: anyio-3.5.0, xdist-3.0.2, cov-4.0.0
collected 385 items / 1 skipped

tests/unit/core/test_dispatch.py ..                                      [  0%]

tests/unit/core/test_protocols.py .........                              [  2%]

tests/unit/core/test_version.py .                                        [  3%]

tests/unit/dag/test_base_operator.py ....                                [  4%]

tests/unit/dag/test_column_selector.py ..............................    [ 11%]

tests/unit/dag/test_dictarray.py ...                                     [ 12%]

tests/unit/dag/test_executors.py ..                                      [ 13%]

tests/unit/dag/test_graph.py ....                                        [ 14%]

tests/unit/dag/ops/test_selection.py ....                                [ 15%]

tests/unit/io/test_io.py ............................................... [ 27%]

................................................................         [ 44%]

tests/unit/schema/test_column_schemas.py .......................         [ 50%]

tests/unit/schema/test_schema.py .............                           [ 53%]

tests/unit/schema/test_schema_io.py .................................... [ 62%]

........................................................................ [ 81%]

........................................................                 [ 96%]

tests/unit/schema/test_tags.py .......                                   [ 97%]

tests/unit/utils/test_utils.py ........                                  [100%]


=============================== warnings summary ===============================

tests/unit/io/test_io.py::test_validate_and_regenerate_dataset

/var/jenkins_home/workspace/merlin_core/core/merlin/io/parquet.py:551: DeprecationWarning: 'ParquetDataset.pieces' attribute is deprecated as of pyarrow 5.0.0 and will be removed in a future version. Specify 'use_legacy_dataset=False' while constructing the ParquetDataset, and then use the '.fragments' attribute instead.

paths = [p.path for p in pa_dataset.pieces]


tests/unit/schema/test_column_schemas.py::test_column_schema_tags_normalize

tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.ITEM_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.ITEM: 'item'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_schema_io.py::test_json_serialization_with_embedded_dicts

tests/unit/schema/test_schema_io.py::test_merlin_to_proto_to_json_to_merlin

tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.USER_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.USER: 'user'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.SESSION_ID have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.SESSION: 'session'>, <Tags.ID: 'id'>].

warnings.warn(


tests/unit/schema/test_tags.py::test_tagset_atomizes_compound_tags

/var/jenkins_home/workspace/merlin_core/core/merlin/schema/tags.py:148: UserWarning: Compound tags like Tags.TEXT_TOKENIZED have been deprecated and will be removed in a future version. Please use the atomic versions of these tags, like [<Tags.TEXT: 'text'>, <Tags.TOKENIZED: 'tokenized'>].

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[True-True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 39897 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[True-False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 45005 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[False-True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 43173 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed[False-False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 39871 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed_force[True]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 35519 instead

warnings.warn(


tests/unit/utils/test_utils.py::test_nvt_distributed_force[False]

/var/jenkins_home/.local/lib/python3.8/site-packages/distributed/node.py:180: UserWarning: Port 8787 is already in use.

Perhaps you already have a cluster running?

Hosting the HTTP server on port 38811 instead

warnings.warn(


-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html


---------- coverage: platform linux, python 3.8.10-final-0 -----------

Name                                      Stmts   Miss  Cover


merlin/core/init.py                       2      0   100%

merlin/core/_version.py                     354    205    42%

merlin/core/compat.py                        10      4    60%

merlin/core/dispatch.py                     355    215    39%

merlin/core/protocols.py                    100     45    55%

merlin/core/utils.py                        195     56    71%

merlin/dag/init.py                        5      0   100%

merlin/dag/base_operator.py                 122     20    84%

merlin/dag/dictarray.py                      54     15    72%

merlin/dag/executors.py                     125     57    54%

merlin/dag/graph.py                          99     35    65%

merlin/dag/node.py                          344    161    53%

merlin/dag/ops/init.py                    4      0   100%

merlin/dag/ops/concat_columns.py             17      4    76%

merlin/dag/ops/selection.py                  22      0   100%

merlin/dag/ops/subset_columns.py             12      4    67%

merlin/dag/ops/subtraction.py                21     11    48%

merlin/dag/selector.py                      101      6    94%

merlin/io/init.py                         4      0   100%

merlin/io/avro.py                            88     88     0%

merlin/io/csv.py                             57      6    89%

merlin/io/dask.py                           181     53    71%

merlin/io/dataframe_engine.py                61      5    92%

merlin/io/dataframe_iter.py                  21      1    95%

merlin/io/dataset.py                        346     54    84%

merlin/io/dataset_engine.py                  37      8    78%

merlin/io/fsspec_utils.py                   127    108    15%

merlin/io/hugectr.py                         45     35    22%

merlin/io/parquet.py                        603     69    89%

merlin/io/shuffle.py                         38     12    68%

merlin/io/worker.py                          80     66    18%

merlin/io/writer.py                         190     52    73%

merlin/io/writer_factory.py                  18      4    78%

merlin/schema/init.py                     2      0   100%

merlin/schema/io/init.py                  0      0   100%

merlin/schema/io/proto_utils.py              20      4    80%

merlin/schema/io/schema_bp.py               306      5    98%

merlin/schema/io/tensorflow_metadata.py     190     18    91%

merlin/schema/schema.py                     209     33    84%

merlin/schema/tags.py                        82      1    99%


TOTAL                                      4647   1460    69%


=========================== short test summary info ============================

SKIPPED [1] tests/unit/io/test_avro.py:34: could not import 'uavro': No module named 'uavro'

============ 385 passed, 1 skipped, 14 warnings in 68.62s (0:01:08) ============

___________________________________ summary ____________________________________

test-gpu: commands succeeded

congratulations :)

Performing Post build task...

Match found for : : True

Logical operation result is TRUE

Running script  : #!/bin/bash

cd /var/jenkins_home/

CUDA_VISIBLE_DEVICES=1 python test_res_push.py "https://api.GitHub.com/repos/NVIDIA-Merlin/core/issues/$ghprbPullId/comments" "/var/jenkins_home/jobs/$JOB_NAME/builds/$BUILD_NUMBER/log"

[merlin_core] $ /bin/bash /tmp/jenkins2146385607739022094.sh

@jperez999 jperez999 merged commit 563be4b into NVIDIA-Merlin:main Nov 1, 2022
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Reviewers

@oliverholworthy oliverholworthy oliverholworthy approved these changes

@karlhigley karlhigley Awaiting requested review from karlhigley

@EvenOldridge EvenOldridge Awaiting requested review from EvenOldridge

@nv-alaiacano nv-alaiacano Awaiting requested review from nv-alaiacano

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@jperez999 @nvidia-merlin-bot @karlhigley @oliverholworthy