Use dockerized Fuseki for PHPUnit tests

.github/workflows/ci.yml

@@ -31,7 +31,7 @@ jobs:
         key: fuseki-${{ hashFiles('tests/init_fuseki.sh') }}
 
     - name: Start up Fuseki
-      run: cd tests; sh ./init_fuseki.sh
+      run: cd tests; ./init_fuseki.sh
 
     - name: Cache Composer dependencies
       uses: actions/cache@v3

dockerfiles/config/skosmos.ttl

@@ -32,7 +32,7 @@
 
 :tdb_dataset_readwrite rdf:type tdb2:DatasetTDB2 ;
     tdb2:location               "/fuseki/databases/skosmos" ;
-    # tdb2:unionDefaultGraph    true ;
+    tdb2:unionDefaultGraph    true ;
 .
 
 <#indexLucene> rdf:type text:TextIndexLucene ;

tests/ModelTest.php

@@ -117,7 +117,7 @@ public function testGetVocabularyByGraphUri()
     public function testGetVocabularyByInvalidGraphUri()
     {
         $this->expectException(ValueError::class);
-        $this->expectExceptionMessage("no vocabulary found for graph http://no/address and endpoint http://localhost:13030/skosmos-test/sparql");
+        $this->expectExceptionMessage("no vocabulary found for graph http://no/address and endpoint http://localhost:9030/skosmos/sparql");
         $vocab = $this->model->getVocabularyByGraph('http://no/address');
         $this->assertInstanceOf('Vocabulary', $vocab);
     }

tests/VocabularyTest.php

@@ -43,7 +43,7 @@ public function testGetEndpoint()
     {
         $vocab = $this->model->getVocabulary('testdiff');
         $endpoint = $vocab->getEndpoint();
-        $this->assertEquals('http://localhost:13030/skosmos-test/sparql', $endpoint);
+        $this->assertEquals('http://localhost:9030/skosmos/sparql', $endpoint);
     }
 
     /**

tests/bootstrap.php

@@ -5,8 +5,8 @@
 // make sure that a SPARQL endpoint is set by an environment variable
 $endpoint = getenv('SKOSMOS_SPARQL_ENDPOINT');
 if (!$endpoint) {
-    // default to Fuseki running on localhost:13030 as provided by init_fuseki.sh
-    putenv('SKOSMOS_SPARQL_ENDPOINT=http://localhost:13030/skosmos-test/sparql');
+    // default to Fuseki running on localhost:9030 as provided by init_fuseki.sh
+    putenv('SKOSMOS_SPARQL_ENDPOINT=http://localhost:9030/skosmos/sparql');
 }
 
 # Allow running git commands in the php-actions/phpunit container

tests/init_fuseki.sh

@@ -1,37 +1,16 @@
 #!/bin/bash
-# Note: This script must be sourced from within bash, e.g. ". init_fuseki.sh"
 
-FUSEKI_VERSION=${FUSEKI_VERSION:-4.4.0}
+# Build and start up containers (skosmos, skosmos-cache, fuseki)
+cd ../dockerfiles
+docker compose up -d --build
 
-if [ "$FUSEKI_VERSION" = "SNAPSHOT" ]; then
-    # find out the latest snapshot version and its download URL by parsing Apache directory listings
-    snapshotdir="https://repository.apache.org/content/repositories/snapshots/org/apache/jena/apache-jena-fuseki/"
-    latestdir=$(wget -q -O- "$snapshotdir" | grep 'a href=' | cut -d '"' -f 2 | grep SNAPSHOT | tail -n 1)
-    FUSEKI_VERSION=$(basename "$latestdir")
-    fusekiurl=$(wget -q -O- "$latestdir" | grep 'a href=' | cut -d '"' -f 2 | grep '\.tar\.gz$' | tail -n 1)
-else
-    fusekiurl="https://repository.apache.org/content/repositories/releases/org/apache/jena/apache-jena-fuseki/$FUSEKI_VERSION/apache-jena-fuseki-$FUSEKI_VERSION.tar.gz"
-fi
+# FIXME: should check that it's up instead of blindly waiting 5 seconds
+echo "Waiting for Fuseki to get ready"
+sleep 5
 
-if [ ! -f "apache-jena-fuseki-$FUSEKI_VERSION/fuseki-server" ]; then
-    echo "fuseki server file not found - downloading it"
-    wget --no-verbose --output-document=fuseki-dist.tar.gz "$fusekiurl"
-    echo "uncompressing fuseki distribution"
-    tar -zxf fuseki-dist.tar.gz
-fi
-
-cd "apache-jena-fuseki-$FUSEKI_VERSION"
-chmod +x fuseki-server bin/s-put
-./fuseki-server --port=13030 --config ../fuseki-assembler.ttl &
-until curl --output /dev/null --silent --head --fail http://localhost:13030; do
-    printf '.'
-    sleep 2
-done
-
-for fn in ../test-vocab-data/*.ttl; do
+for fn in ../tests/test-vocab-data/*.ttl; do
     name=$(basename "${fn}" .ttl)
-    $(./bin/s-put http://localhost:13030/skosmos-test/data "http://www.skosmos.skos/$name/" "$fn")
+    echo "Loading test vocabulary $name"
+    curl -I -X POST -H Content-Type:text/turtle -T "$fn" -G http://localhost:9030/skosmos/data --data-urlencode graph="http://www.skosmos.skos/$name/"
+    echo
 done
-
-cd ..
-

tests/testconfig.ttl

@@ -22,7 +22,7 @@
 
 :config a skosmos:Configuration ;
     # SPARQL endpoint defaults to $SKOSMOS_SPARQL_ENDPOINT environment var
-    # skosmos:sparqlEndpoint <http://localhost:13030/skosmos-test/sparql> ;
+    # skosmos:sparqlEndpoint <http://localhost:9030/skosmos/sparql> ;
     # sparql-query extension, or "Generic" for plain SPARQL 1.1
     # set to "JenaText" instead if you use Fuseki with jena-text index
     # skosmos:sparqlDialect "JenaText" ;