Add current steps to sample details #167
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alneberg
reviewed
Jan 20, 2025
LIMS2DB/classes.py
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| current_steps = {} | ||
| for step in sample_in_steps: | ||
| step_details = get_protocolstep_details(self.session, step[0])[0] | ||
| current_steps[step_details[0]] = {"protocol_name": step_details[1], "is_qc_protocol": step_details[2]} |
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Do we need to check whether step_details is not empty list, it would raise an exception in that case.
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If a sample is assigned to a step in LIMS, the definition for that step should also exist. If we get an empty list, then there would be something very wrong in LIMS.
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Dependent on NationalGenomicsInfrastructure/genologics_sql#19