Releases: NeuroML/pyNeuroML
Releases · NeuroML/pyNeuroML
v1.1.5
What's Changed
- feat(pynml): do not import plotters if mpl is not already imported by @sanjayankur31 in #269
Full Changelog: v1.1.4...v1.1.5
v1.1.4
What's Changed
- Close cylindrical meshes for vispy viewer by @sanjayankur31 in #264
Full Changelog: v1.1.3...v1.1.4
v1.1.3
What's Changed
- chore(deps): remove unused pandas by @sanjayankur31 in #261
- Improve performance of vispy plotter using meshes and their instances by @sanjayankur31 in #260
- For 1.1.3 release by @sanjayankur31 in #263
Full Changelog: v1.1.2...v1.1.3
v1.1.2
What's Changed
- Reduce memory usage when generating morph plots and a few minor fixes by @sanjayankur31 in #258
- To 1.1.2 by @sanjayankur31 in #259
Full Changelog: v1.1.1...v1.1.2
v1.1.1
What's Changed
- To v1.1.0; uses jnml jar 0.12.4 by @pgleeson in #256
- feat(write): include HDF5 writing by @sanjayankur31 in #255
- Feat/hybrid plots: allow users to specify how they want various cells in networks to be plotted by @sanjayankur31 in #253
- Changes for NML v2.3 release by @pgleeson in #257
Full Changelog: v1.1.0...v1.1.1
v1.1.0
What's Changed
- fix(plots): provide axis for colorbar by @sanjayankur31 in #252
- fix(vispy-morph): get title from cell object if no network is found by @sanjayankur31 in #251
- feat(morph-plots): improve colouring of cells/groups in schematic plot by @sanjayankur31 in #248
- feat(pynml): include more info in version by @sanjayankur31 in #249
- Feat/chan den analysis by @sanjayankur31 in #242
- Feat/nsgr integration by @sanjayankur31 in #243
- To v1.1.0; Update to jnml v0.12.3 jar by @pgleeson in #254
Full Changelog: v1.0.10...v1.1.0
v1.0.10
What's Changed
- feat(generate-if-curve): allow specifying segment and fraction along by @sanjayankur31 in #235
- Chore/remove deprecated setup.py by @pgleeson in #234
- chore: remove deprecated setup.py by @sanjayankur31 in #233
- Feat/add all contributors by @sanjayankur31 in #240
- Remove argparse dependency by @pgleeson in #244
- To v1.0.9 by @pgleeson in #245
- feat: add method to rotate cell by @sanjayankur31 in #218
- feat(if-curve): save spike threshold current value also by @sanjayankur31 in #237
- Feat: extend morphology plotting methods to accept a file path and objects; move vispy bits to separate module to reduce import errors (breaking) by @sanjayankur31 in #238
- allow netpyne runner to also return command output by @pgleeson in #246
- feat(pynml-netpyne): allow netpyne runner to also return command output by @sanjayankur31 in #239
- To v1.0.10; removed 'experimental' build config, uses 'dev' as development env/dependencies by @pgleeson in #247
Full Changelog: v1.0.8...v1.0.10
v1.0.9
What's Changed
- feat(generate-if-curve): allow specifying segment and fraction along by @sanjayankur31 in #235
- Chore/remove deprecated setup.py by @pgleeson in #234
- chore: remove deprecated setup.py by @sanjayankur31 in #233
- Feat/add all contributors by @sanjayankur31 in #240
- Remove argparse dependency by @pgleeson in #244
- To v1.0.9 by @pgleeson in #245
- feat: add method to rotate cell by @sanjayankur31 in #218
- feat(if-curve): save spike threshold current value also by @sanjayankur31 in #237
- Feat: extend morphology plotting methods to accept a file path and objects; move vispy bits to separate module to reduce import errors (breaking) by @sanjayankur31 in #238
- allow netpyne runner to also return command output by @pgleeson in #246
- feat(pynml-netpyne): allow netpyne runner to also return command output by @sanjayankur31 in #239
Full Changelog: v1.0.8...v1.0.9
v1.0.8
Intermediate release pre NMLv2.3
What's Changed
- Feature: add functions to create a combine archive from a provided "root" file by @sanjayankur31 in #208
- ci(py311): add py311 to ci and setup.py by @sanjayankur31 in #211
- feat: improve installation of extra deps by @sanjayankur31 in #212
- Adding logic for one-shot validation of multiple input files by @borismarin in #215
- test(modchananalysis): test to check that nrnivmodl is run when required by @sanjayankur31 in #217
- pynml-modchananalysis excepting on division by zero by @borismarin in #216
- Feat/more morphplots -> exp by @pgleeson in #219
- Feat/more morphplots by @sanjayankur31 in #213
- A few minor changes and bugfix for 2d plotting by @pgleeson in #221
- Plotting fixes related to #220, and regenerates man pages by @sanjayankur31 in #222
- Fix for reloading saved spike data by @pgleeson in #223
- chore: regenerate man pages by @sanjayankur31 in #226
- Update to v1.0.1 with jnml jar v0.12.2 by @pgleeson in #227
- To v1.0.2 & fix for pypi by @pgleeson in #228
- Install pyelectro & neurotune from pypi by @pgleeson in #229
- To v1.0.6 & remove inspyred req by @pgleeson in #230
- To v1.0.7; remove inspyred from setup.py all reqs by @pgleeson in #231
- To v1.0.8; Catches import of vispy so won't fail if not installed. by @pgleeson in #232
Full Changelog: v0.7.5...v1.0.8
v1.0.7
What's Changed
- Feature: add functions to create a combine archive from a provided "root" file by @sanjayankur31 in #208
- ci(py311): add py311 to ci and setup.py by @sanjayankur31 in #211
- feat: improve installation of extra deps by @sanjayankur31 in #212
- Adding logic for one-shot validation of multiple input files by @borismarin in #215
- test(modchananalysis): test to check that nrnivmodl is run when required by @sanjayankur31 in #217
- pynml-modchananalysis excepting on division by zero by @borismarin in #216
- Feat/more morphplots -> exp by @pgleeson in #219
- Feat/more morphplots by @sanjayankur31 in #213
- A few minor changes and bugfix for 2d plotting by @pgleeson in #221
- Plotting fixes related to #220, and regenerates man pages by @sanjayankur31 in #222
- Fix for reloading saved spike data by @pgleeson in #223
- chore: regenerate man pages by @sanjayankur31 in #226
- Update to v1.0.1 with jnml jar v0.12.2 by @pgleeson in #227
- To v1.0.2 & fix for pypi by @pgleeson in #228
- Install pyelectro & neurotune from pypi by @pgleeson in #229
- To v1.0.6 & remove inspyred req by @pgleeson in #230
- To v1.0.7; remove inspyred from setup.py all reqs by @pgleeson in #231
Full Changelog: v0.7.5...v1.0.7