pickle and ADIOS2 formatting fixed for OGB dataset #1344
Workflow file for this run
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name: CI | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
branches: | |
- main | |
schedule: | |
- cron: '0 3 * * 1' | |
jobs: | |
build: | |
runs-on: ubuntu-20.04 | |
strategy: | |
matrix: | |
python: [3.7, 3.8] | |
steps: | |
- name: Setup Python | |
uses: actions/setup-python@v2 | |
with: | |
python-version: ${{ matrix.python }} | |
- name: Checkout GCNN | |
uses: actions/checkout@v2.2.0 | |
- name: Install MPI | |
run: | | |
sudo apt-get update | |
sudo apt-get install -y libopenmpi-dev | |
sudo apt-get clean | |
- name: Cache pip | |
uses: actions/cache@v2 | |
id: cache | |
with: | |
path: ${{ env.pythonLocation }} | |
key: ${{ env.pythonLocation }}-${{ hashFiles('requirements.txt') }}-${{ hashFiles('requirements-dev.txt') }}-${{ hashFiles('requirements-torchdep.txt') }} | |
- name: Install dependencies | |
if: steps.cache.outputs.cache-hit != 'true' | |
run: | | |
python -m pip install --upgrade pip | |
python -m pip install --upgrade -r requirements.txt -r requirements-dev.txt | |
python -m pip install --upgrade -r requirements-torchdep.txt | |
- name: Format black | |
run: | | |
black . | |
git diff --exit-code | |
- name: Run pytest | |
run: | | |
# FIXME: install | |
export PYTHONPATH=$PYTHONPATH:~/HydraGNN | |
pip list | |
python -m pytest -rfEP -W error -W ignore::DeprecationWarning -W ignore::UserWarning --tb=native | |
mpirun -n 2 --oversubscribe python -m pytest -rfEP -W error -W ignore::DeprecationWarning -W ignore::UserWarning --tb=native --with-mpi |