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Updated README to contain link to SDSL.
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OndrejSladky committed Feb 29, 2024
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# FMSI ($f$-Masked Superstring Index)

FMSI provides an experimental implementation of a BWT based indexing tool for
[masked superstrings](https://doi.org/10.1101/2023.02.01.526717).
FMSI provides an experimental implementation of FMS-index - a BWT based indexing tool for
$f$-masked superstrings, which enables to ask membership queries and perform set operations on the
$k$-mer sets represented by the masked superstrings.

The implementation is based on the [SDSL library](https://github.com/simongog/sdsl-lite).


It is provided under the MIT license (see LICENSE file).

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