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Fix for Fahrenheit deltas, degree-days and others. #6876

Fix for Fahrenheit deltas, degree-days and others.

Fix for Fahrenheit deltas, degree-days and others. #6876

Workflow file for this run

name: xclim Testing Suite
on:
push:
branches:
- main
paths-ignore:
- CHANGES.rst
- README.rst
- pyproject.toml
- xclim/__init__.py
pull_request:
types:
- opened
- reopened
- synchronize
pull_request_review:
types:
- submitted
env:
XCLIM_TESTDATA_BRANCH: v2023.12.14
concurrency:
# For a given workflow, if we push to the same branch, cancel all previous builds on that branch except on main.
group: "${{ github.workflow }}-${{ github.ref }}"
cancel-in-progress: ${{ github.ref != 'refs/heads/main' }}
permissions:
contents: read
pull-requests: read
jobs:
lint:
name: Black (Python${{ matrix.python-version }})
runs-on: ubuntu-latest
if: |
((github.event_name == 'pull_request') && (github.event.action != 'labeled')) ||
(github.event.review.state == 'approved') ||
(github.event_name == 'push')
strategy:
matrix:
python-version:
- "3.9"
steps:
- name: Harden Runner
uses: step-security/harden-runner@17d0e2bd7d51742c71671bd19fa12bdc9d40a3d6 # v2.8.1
with:
disable-sudo: true
egress-policy: block
allowed-endpoints: >
files.pythonhosted.org:443
github.com:443
pypi.org:443
- name: Checkout Repository
uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
- name: Set up Python${{ matrix.python-version }}
uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d # v5.1.0
with:
python-version: ${{ matrix.python-version }}
- name: Install CI libraries
run: |
python -m pip install -r CI/requirements_ci.txt
- name: Run pylint
run: |
python -m pylint --rcfile=.pylintrc.toml --disable=import-error --exit-zero xclim
- name: Run linting suite
run: |
python -m tox -e lint
test-py39:
name: test-${{ matrix.tox-env }} (Python${{ matrix.python-version }})
needs: lint
if: |
(github.event_name == 'pull_request') && !contains(github.event.pull_request.labels.*.name, 'approved')
runs-on: ubuntu-latest
strategy:
matrix:
include:
- tox-env: "py39" # "py39-coverage"
python-version: "3.9"
steps:
- name: Harden Runner
uses: step-security/harden-runner@17d0e2bd7d51742c71671bd19fa12bdc9d40a3d6 # v2.8.1
with:
disable-sudo: true
egress-policy: block
allowed-endpoints: >
api.github.com:443
dap.service.does.not.exist:443
files.pythonhosted.org:443
github.com:443
pypi.org:443
raw.githubusercontent.com:443
- name: Checkout Repository
uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
- name: Set up Python${{ matrix.python-version }}
uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d # v5.1.0
with:
python-version: ${{ matrix.python-version }}
- name: Install CI libraries
run: |
python -m pip install -r CI/requirements_ci.txt
- name: Test with tox
run: |
python -m tox -e ${{ matrix.tox-env }}
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
# COVERALLS_FLAG_NAME: run-{{ matrix.tox-env }}
# COVERALLS_SERVICE_NAME: github
test-pypi:
needs: lint
name: ${{ matrix.tox-env }} (Python${{ matrix.python-version }}, ${{ matrix.os }})
if: |
contains(github.event.pull_request.labels.*.name, 'approved') ||
(github.event.review.state == 'approved') ||
(github.event_name == 'push')
runs-on: ${{ matrix.os }}
strategy:
matrix:
include:
# Windows builds
- tox-env: py39-coverage-prefetch
python-version: "3.9"
markers: -m 'not slow'
os: windows-latest
# macOS builds
- tox-env: py310-coverage-lmoments-doctest
python-version: "3.10"
markers: -m 'not slow'
os: macos-latest
# Linux builds
- tox-env: py39-coverage-sbck-doctest
python-version: "3.9"
markers: -m 'not slow'
os: ubuntu-latest
- tox-env: py310-coverage-lmoments # No markers -- includes slow tests
python-version: "3.10"
os: ubuntu-latest
- tox-env: py311-coverage-sbck
python-version: "3.11"
markers: -m 'not slow'
os: ubuntu-latest
- tox-env: py312-coverage-lmoments-doctest
python-version: "3.12"
markers: -m 'not slow'
os: ubuntu-latest
- tox-env: notebooks
python-version: "3.10"
os: ubuntu-latest
- tox-env: offline-prefetch
python-version: "3.11"
markers: -m 'not slow and not requires_internet'
os: ubuntu-latest
steps:
- name: Harden Runner
uses: step-security/harden-runner@17d0e2bd7d51742c71671bd19fa12bdc9d40a3d6 # v2.8.1
with:
egress-policy: block
allowed-endpoints: >
api.github.com:443
azure.archive.ubuntu.com:80
coveralls.io:443
dap.service.does.not.exist:443
esm.ubuntu.com:443
files.pythonhosted.org:443
github.com:443
motd.ubuntu.com:443
packages.microsoft.com:443
ppa.launchpadcontent.net:443
pypi.org:443
raw.githubusercontent.com:443
- uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
- name: Install Eigen3
if: contains(matrix.tox-env, 'sbck')
run: |
sudo apt-get update
sudo apt-get install libeigen3-dev
- name: Set up Python${{ matrix.python-version }}
uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d # v5.1.0
with:
python-version: ${{ matrix.python-version }}
- name: Install CI libraries
run: |
python -m pip install -r CI/requirements_ci.txt
- name: Test with tox
run: |
python -m tox -e ${{ matrix.tox-env }} -- ${{ matrix.markers }}
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
COVERALLS_FLAG_NAME: run-{{ matrix.tox-env }}-{{ matrix.os }}
COVERALLS_PARALLEL: true
COVERALLS_SERVICE_NAME: github
test-conda:
needs: lint
name: Python${{ matrix.python-version }} (Conda, ${{ matrix.os }})
if: |
contains(github.event.pull_request.labels.*.name, 'approved') ||
(github.event.review.state == 'approved') ||
(github.event_name == 'push')
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-latest]
python-version: ["3.9", "3.12"]
defaults:
run:
shell: bash -l {0}
steps:
- name: Harden Runner
uses: step-security/harden-runner@17d0e2bd7d51742c71671bd19fa12bdc9d40a3d6 # v2.8.1
with:
disable-sudo: true
egress-policy: block
allowed-endpoints: >
api.github.com:443
conda.anaconda.org:443
coveralls.io:443
dap.service.does.not.exist:443
files.pythonhosted.org:443
github.com:443
objects.githubusercontent.com:443
pypi.org:443
raw.githubusercontent.com:443
repo.anaconda.com:443
- name: Checkout Repository
uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
- name: Setup Conda (Micromamba) with Python${{ matrix.python-version }}
uses: mamba-org/setup-micromamba@f8b8a1e23a26f60a44c853292711bacfd3eac822 # v1.9.0
with:
cache-downloads: true
cache-environment: true
environment-file: environment.yml
create-args: >-
conda
python=${{ matrix.python-version }}
- name: Conda and Mamba versions
run: |
conda --version
echo "micromamba: $(micromamba --version)"
- name: Install xclim
run: |
python -m pip install --no-user --editable .
- name: Check versions
run: |
conda list
xclim show_version_info
python -m pip check || true
- name: Test with pytest
run: |
python -m pytest --numprocesses=logical --durations=10 --cov=xclim --cov-report=term-missing
# - name: Install tox
# shell: bash -l {0}
# run: |
# mamba install -n xclim39 tox tox-conda
# - name: Test
# shell: bash -l {0}
# run: |
# conda activate xclim39
# tox -e opt-slow
# env:
# CONDA_EXE: mamba
# GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
- name: Report coverage
run: |
pip install --upgrade coveralls
coveralls
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
COVERALLS_FLAG_NAME: run-{{ matrix.tox-env }}-opt-slow
COVERALLS_PARALLEL: true
COVERALLS_SERVICE_NAME: github
finish:
needs:
- test-pypi
- test-conda
runs-on: ubuntu-latest
container: python:3-slim
steps:
- name: Checkout Repository
uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
with:
sparse-checkout: |
CI/requirements_ci.txt
- name: Install CI libraries
run: |
python -m pip install -r CI/requirements_ci.txt
- name: Coveralls finished
run: |
python -m coveralls --finish
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
COVERALLS_SERVICE_NAME: github