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This closes #3
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Thomas Kuilman committed Jun 6, 2015
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- [ ] Remove plotting of self vs self
- [ ] Remove blacklisted regions by excluding regions and not excluding bins
- [ ] Change CopywriteR to allow custom bins?
- [x] Fixed issue regarding mixing of chromosomes during plotting (implemented in version 2.0.4)
- [x] Compile into bioConductor package (implemented in source code)
- [x] Reset the working directories after analysis
- [x] Fix bug related to bin-spanning peaks (implemented in source code)
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