start_cluster = True, cluster = <cluster.Cluster object at 0x7f9a5baeea90>

    @pytest.mark.timeout(300,func_only=True)
    def test_logical_PBM_T221(start_cluster,cluster):
        cluster.check_pbm_status()
>       cluster.make_backup("logical")

test_PBM-773.py:57: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <cluster.Cluster object at 0x7f9a5baeea90>, type = 'logical'

    def make_backup(self, type):
        n = testinfra.get_host("docker://" + self.pbm_cli)
        timeout = time.time() + 120
        while True:
            running = self.get_status()['running']
            Cluster.log("Current operation: " + str(running))
            if not running:
                if type:
                    start = n.run(
                        'pbm backup --out=json --type=' + type)
                else:
                    start = n.run('pbm backup --out=json')
                if start.rc == 0:
                    name = json.loads(start.stdout)['name']
                    Cluster.log("Backup started")
                    break
                elif "resync" in start.stdout:
                    Cluster.log("Resync in progress, retrying: " + start.stdout)
                else:
                    logs = n.check_output("pbm logs -sD -t0")
>                   assert False, "Backup failed" + start.stdout + start.stderr + '\n' + logs
E                   AssertionError: Backup failed{"Error":"get backup metadata: get: context deadline exceeded"}
E                   
E                   2024-09-06T06:00:25Z I [rs1/rs103:27017] pbm-agent:
E                   Version:   2.6.0
E                   Platform:  linux/amd64
E                   GitCommit: d18cc8320e61b3fcbde1f1af16e92a3e0d50e00d
E                   GitBranch: dev
E                   BuildTime: 2024-09-06_05:34_UTC
E                   GoVersion: go1.23.1
E                   2024-09-06T06:00:25Z I [rs1/rs103:27017] starting PITR routine
E                   2024-09-06T06:00:25Z I [rs1/rs102:27017] pbm-agent:
E                   Version:   2.6.0
E                   Platform:  linux/amd64
E                   GitCommit: d18cc8320e61b3fcbde1f1af16e92a3e0d50e00d
E                   GitBranch: dev
E                   BuildTime: 2024-09-06_05:34_UTC
E                   GoVersion: go1.23.1
E                   2024-09-06T06:00:25Z I [rs1/rs102:27017] starting PITR routine
E                   2024-09-06T06:00:25Z I [rs2/rs201:27017] pbm-agent:
E                   Version:   2.6.0
E                   Platform:  linux/amd64
E                   GitCommit: d18cc8320e61b3fcbde1f1af16e92a3e0d50e00d
E                   GitBranch: dev
E                   BuildTime: 2024-09-06_05:34_UTC
E                   GoVersion: go1.23.1
E                   2024-09-06T06:00:25Z I [rs1/rs101:27017] pbm-agent:
E                   Version:   2.6.0
E                   Platform:  linux/amd64
E                   GitCommit: d18cc8320e61b3fcbde1f1af16e92a3e0d50e00d
E                   GitBranch: dev
E                   BuildTime: 2024-09-06_05:34_UTC
E                   GoVersion: go1.23.1
E                   2024-09-06T06:00:25Z I [rs2/rs201:27017] starting PITR routine
E                   2024-09-06T06:00:25Z I [rs1/rs101:27017] starting PITR routine
E                   2024-09-06T06:00:25Z I [rs1/rs103:27017] node: rs1/rs103:27017
E                   2024-09-06T06:00:25Z I [rs1/rs102:27017] node: rs1/rs102:27017
E                   2024-09-06T06:00:25Z I [rs1/rs101:27017] node: rs1/rs101:27017
E                   2024-09-06T06:00:25Z I [rs2/rs201:27017] node: rs2/rs201:27017
E                   2024-09-06T06:00:25Z I [rs1/rs101:27017] conn level ReadConcern: majority; WriteConcern: majority
E                   2024-09-06T06:00:25Z I [rs1/rs103:27017] conn level ReadConcern: majority; WriteConcern: majority
E                   2024-09-06T06:00:25Z I [rs1/rs102:27017] conn level ReadConcern: majority; WriteConcern: majority
E                   2024-09-06T06:00:25Z I [rs2/rs201:27017] conn level ReadConcern: majority; WriteConcern: majority
E                   2024-09-06T06:00:25Z I [rs1/rs101:27017] listening for the commands
E                   2024-09-06T06:00:25Z I [rs1/rs103:27017] listening for the commands
E                   2024-09-06T06:00:25Z I [rs2/rs201:27017] listening for the commands
E                   2024-09-06T06:00:25Z I [rs1/rs102:27017] listening for the commands
E                   2024-09-06T06:00:27Z I [rscfg/rscfg01:27017] pbm-agent:
E                   Version:   2.6.0
E                   Platform:  linux/amd64
E                   GitCommit: d18cc8320e61b3fcbde1f1af16e92a3e0d50e00d
E                   GitBranch: dev
E                   BuildTime: 2024-09-06_05:34_UTC
E                   GoVersion: go1.23.1
E                   2024-09-06T06:00:27Z I [rscfg/rscfg01:27017] starting PITR routine
E                   2024-09-06T06:00:27Z I [rscfg/rscfg01:27017] node: rscfg/rscfg01:27017
E                   2024-09-06T06:00:27Z I [rscfg/rscfg01:27017] conn level ReadConcern: majority; WriteConcern: majority
E                   2024-09-06T06:00:27Z I [rscfg/rscfg02:27017] pbm-agent:
E                   Version:   2.6.0
E                   Platform:  linux/amd64
E                   GitCommit: d18cc8320e61b3fcbde1f1af16e92a3e0d50e00d
E                   GitBranch: dev
E                   BuildTime: 2024-09-06_05:34_UTC
E                   GoVersion: go1.23.1
E                   2024-09-06T06:00:27Z I [rscfg/rscfg02:27017] starting PITR routine
E                   2024-09-06T06:00:27Z I [rscfg/rscfg02:27017] node: rscfg/rscfg02:27017
E                   2024-09-06T06:00:27Z I [rscfg/rscfg01:27017] listening for the commands
E                   2024-09-06T06:00:27Z I [rscfg/rscfg02:27017] conn level ReadConcern: majority; WriteConcern: majority
E                   2024-09-06T06:00:27Z I [rscfg/rscfg02:27017] listening for the commands
E                   2024-09-06T06:00:27Z I [rs2/rs203:27017] pbm-agent:
E                   Version:   2.6.0
E                   Platform:  linux/amd64
E                   GitCommit: d18cc8320e61b3fcbde1f1af16e92a3e0d50e00d
E                   GitBranch: dev
E                   BuildTime: 2024-09-06_05:34_UTC
E                   GoVersion: go1.23.1
E                   2024-09-06T06:00:27Z I [rs2/rs203:27017] starting PITR routine
E                   2024-09-06T06:00:27Z I [rs2/rs203:27017] node: rs2/rs203:27017
E                   2024-09-06T06:00:27Z I [rs2/rs203:27017] conn level ReadConcern: majority; WriteConcern: majority
E                   2024-09-06T06:00:27Z I [rs2/rs202:27017] pbm-agent:
E                   Version:   2.6.0
E                   Platform:  linux/amd64
E                   GitCommit: d18cc8320e61b3fcbde1f1af16e92a3e0d50e00d
E                   GitBranch: dev
E                   BuildTime: 2024-09-06_05:34_UTC
E                   GoVersion: go1.23.1
E                   2024-09-06T06:00:27Z I [rs2/rs202:27017] starting PITR routine
E                   2024-09-06T06:00:27Z I [rs2/rs203:27017] listening for the commands
E                   2024-09-06T06:00:27Z I [rs2/rs202:27017] node: rs2/rs202:27017
E                   2024-09-06T06:00:27Z I [rs2/rs202:27017] conn level ReadConcern: majority; WriteConcern: majority
E                   2024-09-06T06:00:27Z I [rs2/rs202:27017] listening for the commands
E                   2024-09-06T06:00:29Z I [rscfg/rscfg03:27017] pbm-agent:
E                   Version:   2.6.0
E                   Platform:  linux/amd64
E                   GitCommit: d18cc8320e61b3fcbde1f1af16e92a3e0d50e00d
E                   GitBranch: dev
E                   BuildTime: 2024-09-06_05:34_UTC
E                   GoVersion: go1.23.1
E                   2024-09-06T06:00:29Z I [rscfg/rscfg03:27017] starting PITR routine
E                   2024-09-06T06:00:29Z I [rscfg/rscfg03:27017] node: rscfg/rscfg03:27017
E                   2024-09-06T06:00:29Z I [rscfg/rscfg03:27017] conn level ReadConcern: majority; WriteConcern: majority
E                   2024-09-06T06:00:29Z I [rscfg/rscfg03:27017] listening for the commands
E                   2024-09-06T06:00:30Z W [rs1/rs102:27017] [agentCheckup] get current storage status: query mongo: mongo: no documents in result
E                   2024-09-06T06:00:30Z W [rs2/rs201:27017] [agentCheckup] get current storage status: query mongo: mongo: no documents in result
E                   2024-09-06T06:00:30Z W [rs1/rs101:27017] [agentCheckup] get current storage status: query mongo: mongo: no documents in result
E                   2024-09-06T06:00:30Z W [rs1/rs103:27017] [agentCheckup] get current storage status: query mongo: mongo: no documents in result
E                   2024-09-06T06:00:30Z E [rs1/rs102:27017] [agentCheckup] check storage connection: unable to get storage: get config: get: mongo: no documents in result
E                   2024-09-06T06:00:30Z E [rs1/rs101:27017] [agentCheckup] check storage connection: unable to get storage: get config: get: mongo: no documents in result
E                   2024-09-06T06:00:30Z E [rs2/rs201:27017] [agentCheckup] check storage connection: unable to get storage: get config: get: mongo: no documents in result
E                   2024-09-06T06:00:30Z E [rs1/rs103:27017] [agentCheckup] check storage connection: unable to get storage: get config: get: mongo: no documents in result
E                   2024-09-06T06:00:32Z W [rscfg/rscfg01:27017] [agentCheckup] get current storage status: query mongo: mongo: no documents in result
E                   2024-09-06T06:00:32Z E [rscfg/rscfg01:27017] [agentCheckup] check storage connection: unable to get storage: get config: get: mongo: no documents in result
E                   2024-09-06T06:00:32Z W [rscfg/rscfg02:27017] [agentCheckup] get current storage status: query mongo: mongo: no documents in result
E                   2024-09-06T06:00:32Z E [rscfg/rscfg02:27017] [agentCheckup] check storage connection: unable to get storage: get config: get: mongo: no documents in result
E                   2024-09-06T06:00:32Z W [rs2/rs203:27017] [agentCheckup] get current storage status: query mongo: mongo: no documents in result
E                   2024-09-06T06:00:32Z E [rs2/rs203:27017] [agentCheckup] check storage connection: unable to get storage: get config: get: mongo: no documents in result
E                   2024-09-06T06:00:32Z W [rs2/rs202:27017] [agentCheckup] get current storage status: query mongo: mongo: no documents in result
E                   2024-09-06T06:00:32Z E [rs2/rs202:27017] [agentCheckup] check storage connection: unable to get storage: get config: get: mongo: no documents in result
E                   2024-09-06T06:00:34Z W [rscfg/rscfg03:27017] [agentCheckup] get current storage status: query mongo: mongo: no documents in result
E                   2024-09-06T06:00:34Z E [rscfg/rscfg03:27017] [agentCheckup] check storage connection: unable to get storage: get config: get: mongo: no documents in result
E                   2024-09-06T06:00:35Z I [rscfg/rscfg01:27017] got command resync <ts: 1725602435>
E                   2024-09-06T06:00:35Z I [rscfg/rscfg01:27017] got epoch {1725602434 4}
E                   2024-09-06T06:00:35Z I [rscfg/rscfg02:27017] got command resync <ts: 1725602435>
E                   2024-09-06T06:00:35Z I [rscfg/rscfg02:27017] got epoch {1725602434 4}
E                   2024-09-06T06:00:35Z I [rscfg/rscfg01:27017] [resync] started
E                   2024-09-06T06:00:35Z D [rscfg/rscfg02:27017] [resync] lock not acquired
E                   2024-09-06T06:00:35Z I [rs2/rs203:27017] got command resync <ts: 1725602435>
E                   2024-09-06T06:00:35Z I [rs2/rs203:27017] got epoch {1725602434 4}
E                   2024-09-06T06:00:35Z D [rscfg/rscfg01:27017] [resync] uploading ".pbm.init" [size hint: 5 (5.00B); part size: 10485760 (10.00MB)]
E                   2024-09-06T06:00:35Z I [rs2/rs203:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:35Z I [rs2/rs202:27017] got command resync <ts: 1725602435>
E                   2024-09-06T06:00:35Z I [rs2/rs202:27017] got epoch {1725602434 4}
E                   2024-09-06T06:00:35Z I [rs2/rs202:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:35Z D [rscfg/rscfg01:27017] [resync] got backups list: 0
E                   2024-09-06T06:00:35Z D [rscfg/rscfg01:27017] [resync] got physical restores list: 0
E                   2024-09-06T06:00:35Z D [rscfg/rscfg01:27017] [resync] epoch set to {1725602435 21}
E                   2024-09-06T06:00:35Z I [rscfg/rscfg01:27017] [resync] succeed
E                   2024-09-06T06:00:35Z I [rs1/rs101:27017] got command resync <ts: 1725602435>
E                   2024-09-06T06:00:35Z I [rs2/rs201:27017] got command resync <ts: 1725602435>
E                   2024-09-06T06:00:35Z I [rs1/rs103:27017] got command resync <ts: 1725602435>
E                   2024-09-06T06:00:35Z I [rs1/rs101:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:35Z I [rs1/rs102:27017] got command resync <ts: 1725602435>
E                   2024-09-06T06:00:35Z I [rs2/rs201:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:35Z I [rs1/rs103:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:35Z I [rs1/rs101:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:35Z I [rs2/rs201:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:35Z I [rs1/rs103:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:35Z I [rs1/rs102:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:35Z I [rs1/rs102:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:36Z I [rscfg/rscfg03:27017] got command resync <ts: 1725602435>
E                   2024-09-06T06:00:36Z I [rscfg/rscfg03:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:36Z D [rscfg/rscfg03:27017] [resync] get lock: duplicate operation: 66da9a833f1bd18cd9225da1 [Resync storage]
E                   2024-09-06T06:00:36Z D [rscfg/rscfg03:27017] [resync] lock not acquired
E                   2024-09-06T06:00:40Z I [rs2/rs203:27017] got command resync <ts: 1725602440>
E                   2024-09-06T06:00:40Z I [rs2/rs203:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:40Z I [rs2/rs202:27017] got command resync <ts: 1725602440>
E                   2024-09-06T06:00:40Z I [rs2/rs203:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:40Z I [rs2/rs202:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:40Z I [rs2/rs202:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:40Z I [rs2/rs201:27017] got command resync <ts: 1725602440>
E                   2024-09-06T06:00:40Z I [rs1/rs103:27017] got command resync <ts: 1725602440>
E                   2024-09-06T06:00:40Z I [rs1/rs102:27017] got command resync <ts: 1725602440>
E                   2024-09-06T06:00:40Z I [rs2/rs201:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:40Z I [rs1/rs101:27017] got command resync <ts: 1725602440>
E                   2024-09-06T06:00:40Z I [rs1/rs103:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:40Z I [rs1/rs102:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:40Z I [rs2/rs201:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:40Z I [rs1/rs103:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:40Z I [rs1/rs102:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:40Z I [rs1/rs101:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:40Z I [rs1/rs101:27017] [resync] not a member of the leader rs
E                   2024-09-06T06:00:41Z I [rscfg/rscfg03:27017] got command resync <ts: 1725602440>
E                   2024-09-06T06:00:41Z I [rscfg/rscfg03:27017] got epoch {1725602435 21}
E                   2024-09-06T06:00:41Z I [rscfg/rscfg03:27017] [resync] started
E                   2024-09-06T06:00:41Z D [rscfg/rscfg03:27017] [resync] got backups list: 0
E                   2024-09-06T06:00:41Z D [rscfg/rscfg03:27017] [resync] got physical restores list: 0
E                   2024-09-06T06:00:41Z D [rscfg/rscfg03:27017] [resync] epoch set to {1725602441 7}
E                   2024-09-06T06:00:41Z I [rscfg/rscfg03:27017] [resync] succeed
E                   2024-09-06T06:00:41Z I [rscfg/rscfg01:27017] got command resync <ts: 1725602440>
E                   2024-09-06T06:00:41Z I [rscfg/rscfg01:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:41Z I [rscfg/rscfg02:27017] got command resync <ts: 1725602440>
E                   2024-09-06T06:00:41Z D [rscfg/rscfg01:27017] [resync] get lock: duplicate operation: 66da9a880c2055ffd84fd3b8 [Resync storage]
E                   2024-09-06T06:00:41Z I [rscfg/rscfg02:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:41Z D [rscfg/rscfg01:27017] [resync] lock not acquired
E                   2024-09-06T06:00:41Z I [rscfg/rscfg01:27017] got command backup [name: 2024-09-06T06:00:41Z, compression: none (level: default)] <ts: 1725602441>
E                   2024-09-06T06:00:41Z I [rscfg/rscfg01:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:41Z I [rs2/rs203:27017] got command backup [name: 2024-09-06T06:00:41Z, compression: none (level: default)] <ts: 1725602441>
E                   2024-09-06T06:00:41Z I [rs2/rs203:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:41Z E [rscfg/rscfg01:27017] [backup/2024-09-06T06:00:41Z] unable to proceed with the backup, active lock is present
E                   2024-09-06T06:00:41Z D [rscfg/rscfg02:27017] [resync] get lock: duplicate operation: 66da9a880c2055ffd84fd3b8 [Resync storage]
E                   2024-09-06T06:00:41Z I [rs2/rs202:27017] got command backup [name: 2024-09-06T06:00:41Z, compression: none (level: default)] <ts: 1725602441>
E                   2024-09-06T06:00:41Z D [rscfg/rscfg02:27017] [resync] lock not acquired
E                   2024-09-06T06:00:41Z I [rscfg/rscfg02:27017] got command backup [name: 2024-09-06T06:00:41Z, compression: none (level: default)] <ts: 1725602441>
E                   2024-09-06T06:00:41Z I [rs2/rs202:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:41Z I [rscfg/rscfg02:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:41Z I [rs2/rs201:27017] got command backup [name: 2024-09-06T06:00:41Z, compression: none (level: default)] <ts: 1725602441>
E                   2024-09-06T06:00:41Z I [rs1/rs103:27017] got command backup [name: 2024-09-06T06:00:41Z, compression: none (level: default)] <ts: 1725602441>
E                   2024-09-06T06:00:41Z I [rs1/rs102:27017] got command backup [name: 2024-09-06T06:00:41Z, compression: none (level: default)] <ts: 1725602441>
E                   2024-09-06T06:00:41Z I [rs1/rs103:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:41Z I [rs2/rs201:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:41Z I [rs1/rs102:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:41Z I [rs1/rs101:27017] got command backup [name: 2024-09-06T06:00:41Z, compression: none (level: default)] <ts: 1725602441>
E                   2024-09-06T06:00:41Z I [rs1/rs101:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:42Z I [rscfg/rscfg03:27017] got command backup [name: 2024-09-06T06:00:41Z, compression: none (level: default)] <ts: 1725602441>
E                   2024-09-06T06:00:42Z I [rscfg/rscfg03:27017] got epoch {1725602441 7}
E                   2024-09-06T06:00:56Z D [rs2/rs203:27017] [backup/2024-09-06T06:00:41Z] nomination timeout
E                   2024-09-06T06:00:56Z D [rs2/rs203:27017] [backup/2024-09-06T06:00:41Z] skip after nomination, probably started by another node
E                   2024-09-06T06:00:56Z D [rs2/rs202:27017] [backup/2024-09-06T06:00:41Z] nomination timeout
E                   2024-09-06T06:00:56Z D [rs2/rs202:27017] [backup/2024-09-06T06:00:41Z] skip after nomination, probably started by another node
E                   2024-09-06T06:00:56Z D [rscfg/rscfg02:27017] [backup/2024-09-06T06:00:41Z] nomination timeout
E                   2024-09-06T06:00:56Z D [rscfg/rscfg02:27017] [backup/2024-09-06T06:00:41Z] skip after nomination, probably started by another node
E                   2024-09-06T06:00:56Z D [rs1/rs103:27017] [backup/2024-09-06T06:00:41Z] nomination timeout
E                   2024-09-06T06:00:56Z D [rs1/rs102:27017] [backup/2024-09-06T06:00:41Z] nomination timeout
E                   2024-09-06T06:00:56Z D [rs2/rs201:27017] [backup/2024-09-06T06:00:41Z] nomination timeout
E                   2024-09-06T06:00:56Z D [rs1/rs103:27017] [backup/2024-09-06T06:00:41Z] skip after nomination, probably started by another node
E                   2024-09-06T06:00:56Z D [rs1/rs101:27017] [backup/2024-09-06T06:00:41Z] nomination timeout
E                   2024-09-06T06:00:56Z D [rs1/rs102:27017] [backup/2024-09-06T06:00:41Z] skip after nomination, probably started by another node
E                   2024-09-06T06:00:56Z D [rs2/rs201:27017] [backup/2024-09-06T06:00:41Z] skip after nomination, probably started by another node
E                   2024-09-06T06:00:56Z D [rs1/rs101:27017] [backup/2024-09-06T06:00:41Z] skip after nomination, probably started by another node
E                   2024-09-06T06:00:57Z D [rscfg/rscfg03:27017] [backup/2024-09-06T06:00:41Z] nomination timeout
E                   2024-09-06T06:00:57Z D [rscfg/rscfg03:27017] [backup/2024-09-06T06:00:41Z] skip after nomination, probably started by another node

cluster.py:393: AssertionError