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type object 'FileOptions' has no attribute 'RegisterExtension' in mlflow #7658

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KumoLiu opened this issue Apr 18, 2024 · 1 comment · Fixed by #7659
Open

type object 'FileOptions' has no attribute 'RegisterExtension' in mlflow #7658

KumoLiu opened this issue Apr 18, 2024 · 1 comment · Fixed by #7659
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dependencies Pull requests that update a dependency file

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@KumoLiu
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KumoLiu commented Apr 18, 2024 


[2024-04-17T01:04:36.169Z] ======================================================================

[2024-04-17T01:04:36.169Z] ERROR: test_multi_run (tests.test_handler_mlflow.TestHandlerMLFlow)

[2024-04-17T01:04:36.169Z] ----------------------------------------------------------------------

[2024-04-17T01:04:36.169Z] Traceback (most recent call last):

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/tests/test_handler_mlflow.py", line 97, in test_multi_run

[2024-04-17T01:04:36.169Z]     handler = MLFlowHandler(

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/handlers/mlflow_handler.py", line 154, in __init__

[2024-04-17T01:04:36.169Z]     self.client = mlflow.MlflowClient(tracking_uri=tracking_uri if tracking_uri else None)

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/utils/module.py", line 441, in __getattr__

[2024-04-17T01:04:36.169Z]     raise self._exception

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 60, in testPartExecutor

[2024-04-17T01:04:36.169Z]     yield

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 676, in run

[2024-04-17T01:04:36.169Z]     self._callTestMethod(testMethod)

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 633, in _callTestMethod

[2024-04-17T01:04:36.169Z]     method()

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/site-packages/parameterized/parameterized.py", line 620, in standalone_func

[2024-04-17T01:04:36.169Z]     return func(*(a + p.args), **p.kwargs, **kw)

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/tests/test_handler_mlflow.py", line 168, in test_metrics_track_mock

[2024-04-17T01:04:36.169Z]     handler = MLFlowHandler(

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/handlers/mlflow_handler.py", line 154, in __init__

[2024-04-17T01:04:36.169Z]     self.client = mlflow.MlflowClient(tracking_uri=tracking_uri if tracking_uri else None)

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/utils/module.py", line 441, in __getattr__

[2024-04-17T01:04:36.169Z]     raise self._exception

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 60, in testPartExecutor

[2024-04-17T01:04:36.169Z]     yield

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 676, in run

[2024-04-17T01:04:36.169Z]     self._callTestMethod(testMethod)

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 633, in _callTestMethod

[2024-04-17T01:04:36.169Z]     method()

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/site-packages/parameterized/parameterized.py", line 620, in standalone_func

[2024-04-17T01:04:36.169Z]     return func(*(a + p.args), **p.kwargs, **kw)

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/tests/test_handler_mlflow.py", line 168, in test_metrics_track_mock

[2024-04-17T01:04:36.169Z]     handler = MLFlowHandler(

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/handlers/mlflow_handler.py", line 154, in __init__

[2024-04-17T01:04:36.169Z]     self.client = mlflow.MlflowClient(tracking_uri=tracking_uri if tracking_uri else None)

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/utils/module.py", line 441, in __getattr__

[2024-04-17T01:04:36.169Z]     raise self._exception

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 60, in testPartExecutor

[2024-04-17T01:04:36.169Z]     yield

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 676, in run

[2024-04-17T01:04:36.169Z]     self._callTestMethod(testMethod)

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 633, in _callTestMethod

[2024-04-17T01:04:36.169Z]     method()

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/site-packages/parameterized/parameterized.py", line 620, in standalone_func

[2024-04-17T01:04:36.169Z]     return func(*(a + p.args), **p.kwargs, **kw)

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/tests/test_handler_mlflow.py", line 207, in test_metrics_track_iters_mock

[2024-04-17T01:04:36.169Z]     handler = MLFlowHandler(

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/handlers/mlflow_handler.py", line 154, in __init__

[2024-04-17T01:04:36.169Z]     self.client = mlflow.MlflowClient(tracking_uri=tracking_uri if tracking_uri else None)

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/utils/module.py", line 441, in __getattr__

[2024-04-17T01:04:36.169Z]     raise self._exception

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 60, in testPartExecutor

[2024-04-17T01:04:36.169Z]     yield

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 676, in run

[2024-04-17T01:04:36.169Z]     self._callTestMethod(testMethod)

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 633, in _callTestMethod

[2024-04-17T01:04:36.169Z]     method()

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/site-packages/parameterized/parameterized.py", line 620, in standalone_func

[2024-04-17T01:04:36.169Z]     return func(*(a + p.args), **p.kwargs, **kw)

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/tests/test_handler_mlflow.py", line 207, in test_metrics_track_iters_mock

[2024-04-17T01:04:36.169Z]     handler = MLFlowHandler(

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/handlers/mlflow_handler.py", line 154, in __init__

[2024-04-17T01:04:36.169Z]     self.client = mlflow.MlflowClient(tracking_uri=tracking_uri if tracking_uri else None)

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/utils/module.py", line 441, in __getattr__

[2024-04-17T01:04:36.169Z]     raise self._exception

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 60, in testPartExecutor

[2024-04-17T01:04:36.169Z]     yield

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 676, in run

[2024-04-17T01:04:36.169Z]     self._callTestMethod(testMethod)

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/unittest/case.py", line 633, in _callTestMethod

[2024-04-17T01:04:36.169Z]     method()

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/tests/test_handler_mlflow.py", line 134, in test_metrics_track

[2024-04-17T01:04:36.169Z]     handler = MLFlowHandler(

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/handlers/mlflow_handler.py", line 154, in __init__

[2024-04-17T01:04:36.169Z]     self.client = mlflow.MlflowClient(tracking_uri=tracking_uri if tracking_uri else None)

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/utils/module.py", line 441, in __getattr__

[2024-04-17T01:04:36.169Z]     raise self._exception

[2024-04-17T01:04:36.169Z]   File "/home/jenkins/agent/workspace/Monai-pytorch-versions/monai/utils/module.py", line 399, in optional_import

[2024-04-17T01:04:36.169Z]     pkg = __import__(module)  # top level module

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/site-packages/mlflow/__init__.py", line 34, in <module>

[2024-04-17T01:04:36.169Z]     from mlflow import (

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/site-packages/mlflow/artifacts/__init__.py", line 9, in <module>

[2024-04-17T01:04:36.169Z]     from mlflow.exceptions import MlflowException

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/site-packages/mlflow/exceptions.py", line 4, in <module>

[2024-04-17T01:04:36.169Z]     from mlflow.protos.databricks_pb2 import (

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/site-packages/mlflow/protos/databricks_pb2.py", line 17, in <module>

[2024-04-17T01:04:36.169Z]     from .scalapb import scalapb_pb2 as scalapb_dot_scalapb__pb2

[2024-04-17T01:04:36.169Z]   File "/opt/conda/lib/python3.8/site-packages/mlflow/protos/scalapb/scalapb_pb2.py", line 53, in <module>

[2024-04-17T01:04:36.169Z]     google_dot_protobuf_dot_descriptor__pb2.FileOptions.RegisterExtension(options)

[2024-04-17T01:04:36.169Z] monai.utils.module.OptionalImportError: Please install mlflow before using MLFlowHandler. (type object 'FileOptions' has no attribute 'RegisterExtension').
KumoLiu added a commit to KumoLiu/MONAI that referenced this issue Apr 18, 2024
@KumoLiu
fix Project-MONAI#7658
91ab6ff 
Signed-off-by: YunLiu <55491388+KumoLiu@users.noreply.github.com>
@KumoLiu KumoLiu mentioned this issue Apr 18, 2024
Merged
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KumoLiu added a commit that referenced this issue Apr 19, 2024
@KumoLiu
Add version requirement for mlflow (#7659)
d6e6b24 
Fixes #7658.

### Description
set mlflow>=1.28.0,<=2.11.3
mlflow/mlflow#11740

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Non-breaking change (fix or new feature that would not break
existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing
functionality to change).
- [ ] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u
--net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick
--unittests --disttests`.
- [ ] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/`
folder.

---------

Signed-off-by: YunLiu <55491388+KumoLiu@users.noreply.github.com>
@KumoLiu
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KumoLiu commented Apr 19, 2024

Need revise this one after next release from mlflow.
mlflow/mlflow#11742 (comment)

@KumoLiu KumoLiu reopened this Apr 19, 2024
@KumoLiu KumoLiu added the dependencies Pull requests that update a dependency file label Apr 19, 2024
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Add version requirement for mlflow KumoLiu/MONAI
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