Fix reshape in ViTAutoEnc

[razorx89]

Description

The current implementation of ViTAutoEnc always expects a cubic volume shape and does not reshape the output sequence of ViT based on the patch and volume size. Thus for non-cubic volumes, this results in an exception because the reshape operation fails.

Status

Ready

Types of changes

• Non-breaking change (fix or new feature that would not break existing functionality).
• Breaking change (fix or new feature that would cause existing functionality to change).
• New tests added to cover the changes.
• Integration tests passed locally by running ./runtests.sh -f -u --net --coverage.
• Quick tests passed locally by running ./runtests.sh --quick --unittests --disttests.
• In-line docstrings updated.
• Documentation updated, tested make html command in the docs/ folder.

[wyli]

Thanks, it looks good to me.

[wyli]

/build