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Fixes #2029.

Description

This attempts to fix the itkwidgets and pydicom_seg issues with this notebook. @ericspod has tested the notebook locally through Jupyter on Windows and got (mostly) eveything to work, but it appears to not render the ITK cells under Colab.

Checks

  • Avoid including large-size files in the PR.
  • Clean up long text outputs from code cells in the notebook.
  • For security purposes, please check the contents and remove any sensitive info such as user names and private key.
  • Ensure (1) hyperlinks and markdown anchors are working (2) use relative paths for tutorial repo files (3) put figure and graphs in the ./figure folder
  • Notebook runs automatically ./runner.sh -t <path to .ipynb file>

…s appears to not work on Colab currently

Signed-off-by: Eric Kerfoot <17726042+ericspod@users.noreply.github.com>
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@ericspod ericspod requested review from KumoLiu and kirbyju September 26, 2025 12:49
@KumoLiu
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KumoLiu commented Sep 26, 2025

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KeyError: 'Series UID' in TCIA_PROSTATEx_Prostate_MRI_Anatomy_Model.ipynb

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