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Fix for old guppy API and mod calling newline bug #27

Merged

Psy-Fer merged 3 commits into main from dev

Nov 9, 2023

Owner

Psy-Fer commented Nov 9, 2023

fix model missing from old API for fastq headers
fix calls structure to account for when old API didn't return a list for read splitting
fix a bug where guppy would return an empty basecalled object and cause a new line to be printed in sam/fastq
split up the try/except into blocks within the submit read function

Psy-Fer and others added 3 commits

October 30, 2023 17:08


          Merge pull request #25 from Psy-Fer/main

7892d97

update dev from main


          Handle case where sam_record not available

15d28c6


          Make it work for older guppy 5.0.11

046a361

Psy-Fer merged commit e929dcb into main

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