Release of RTK v2.5.0

Dear RTK users,

[RTK v2.5.0](https://github.com/RTKConsortium/RTK/archive/v2.5.0.zip) has just been released. This release is intended to produce Python packages compatible with the ITK Python packages v5.4rc01.

Release notes:
* Various CI improvements
* Account for yaw and tilt in ImagingRing geometry
* Allow for fast switching in one step spectral CT
* Add inferior and superior clip images in Joseph forward projector
* Remove ITKCudaCommon (now in https://github.com/RTKConsortium/ITKCudaCommon)
* Add various wrappings

Many thanks to all contributors for this release: Matthieu Laurendeau,
Simon Rit, Antoine Robert and Shengpeng Yu.

Simon (for the RTK consortium)

.github/workflows/build-test-cxx-cuda.yml

@@ -3,8 +3,8 @@ name: 'Build, Test RTK with CUDA'
 on: [push,pull_request]
 
 env:
-  itk-git-tag: "v5.3.0"
-  itk-module-deps: "CudaCommon@82ce4108588f36906dffce146bbad6981e5a5a44"
+  itk-git-tag: "v5.4rc01"
+  itk-module-deps: "CudaCommon@v1.0.1"
 
 jobs:
   build-test-cxx:

.github/workflows/build-test-package-python-cuda.yml

@@ -4,18 +4,18 @@ on: [push,pull_request]
 
 env:
   cmake-options: '-DRTK_BUILD_APPLICATIONS:BOOL=OFF -DRTK_CUDA_VERSION=11.6'
-  itk-wheel-tag: 'v5.3.0'
-  itk-python-package-tag: 'dc6a18600233ac69a8f42b7489e4edf6a5d8883a'
+  itk-wheel-tag: 'v5.4rc01'
+  itk-python-package-tag: '5ad02309321621cdc7269b9b68a35013c912271c'
   itk-python-package-org: 'InsightSoftwareConsortium'
-  itk-module-deps: "RTKConsortium/ITKCudaCommon@82ce4108588f36906dffce146bbad6981e5a5a44"
+  itk-module-deps: "RTKConsortium/ITKCudaCommon@v1.0.1"
 
 jobs:
   build-linux-cuda-python-packages:
     runs-on: self-hosted-linux
     strategy:
       max-parallel: 2
       matrix:
-        python-version: ["37", "38", "39", "310", "311"]
+        python3-minor-versions: ["7", "8", "9", "10", "11"]
         manylinux-platform: ["_2_28-x64","2014-x64"]
 
     steps:
@@ -49,21 +49,39 @@ jobs:
         export TARGET_ARCH=`(echo ${MANYLINUX_PLATFORM} | cut -d '-' -f 2)`
         export ITK_MODULE_NO_CLEANUP=TRUE
         echo "Building for manylinux specialization ${MANYLINUX_VERSION} and target architecture ${TARGET_ARCH}"
-        ./dockcross-manylinux-download-cache-and-build-module-wheels.sh "${CMAKE_OPTIONS[@]}" -x "libcuda.so;libcuda.so.1;libcudart.so;libcudart.so.11.0;libcublas.so;libcublas.so.11;libcublasLt.so;libcublasLt.so.11;libcufft.so;libcufft.so.10" cp${{ matrix.python-version }}
+
+        ./dockcross-manylinux-download-cache-and-build-module-wheels.sh "${CMAKE_OPTIONS[@]}" -x "libcuda.so;libcuda.so.1;libcudart.so;libcudart.so.11.0;libcublas.so;libcublas.so.11;libcublasLt.so;libcublasLt.so.11;libcufft.so;libcufft.so.10" cp3${{ matrix.python3-minor-versions }}
         mv *zst ../..
 
+    - name: Validate build output
+      shell: bash
+      run: |
+        /home/srit/miniconda3/envs/py310/bin/python -m pip install twine
+        ls dist/
+
+        MANYLINUX_PLATFORM=${{ matrix.manylinux-platform }}
+        MANYLINUX_VERSION=`(echo ${MANYLINUX_PLATFORM} | cut -d '-' -f 1)`
+        TARGET_ARCH_NAME=`(echo ${MANYLINUX_PLATFORM} | cut -d '-' -f 2)`
+        if [[ ${TARGET_ARCH_NAME} == "x64" ]]; then
+          TARGET_ARCH_NAME="x86_64" # Match auditwheel naming convention
+        fi
+        WHEEL_PATTERN="dist/itk_*cp3${{ matrix.python3-minor-version }}*manylinux${MANYLINUX_VERSION}*${TARGET_ARCH_NAME}.whl"
+
+        echo "Searching for wheels matching pattern ${WHEEL_PATTERN}"
+        /home/srit/miniconda3/envs/py310/bin/python -m twine check ${WHEEL_PATTERN}
+
     - name: Publish Python package as GitHub Artifact
       uses: actions/upload-artifact@v3
       with:
-        name: LinuxWheel${{ matrix.python-version }}-cuda116
+        name: LinuxWheel3${{ matrix.python3-minor-versions }}-cuda116
         path: dist/*.whl
 
   build-windows-cuda-python-packages:
     runs-on: self-hosted-windows
     strategy:
       max-parallel: 2
       matrix:
-        python-version-minor: ["7", "8", "9", "10", "11"]
+        python3-minor-version: ["7", "8", "9", "10", "11"]
 
     steps:
     - uses: actions/checkout@v3
@@ -105,15 +123,26 @@ jobs:
         $env:ITKPYTHONPACKAGE_TAG = "${{ env.itk-python-package-tag }}"
         $env:ITKPYTHONPACKAGE_ORG = "${{ env.itk-python-package-org }}"
         $env:ITK_MODULE_PREQ = "${{ env.itk-module-deps }}"
-        ./windows-download-cache-and-build-module-wheels.ps1 "${{ matrix.python-version-minor }}" -setup_options "--lib-paths ""C:/Program\ Files/NVIDIA\ GPU\ Computing\ Toolkit/CUDA/v11.6/bin"" --exclude-libs ""nvcuda.dll;concrt140.dll;cublas64_11.dll;cublasLt64_11.dll;cudart64_110.dll;cufft64_10.dll""" -cmake_options "${{ env.cmake-options }}"
+        ./windows-download-cache-and-build-module-wheels.ps1 "${{ matrix.python3-minor-version }}" -setup_options "--lib-paths ""C:/Program\ Files/NVIDIA\ GPU\ Computing\ Toolkit/CUDA/v11.6/bin"" --exclude-libs ""nvcuda.dll;concrt140.dll;cublas64_11.dll;cublasLt64_11.dll;cudart64_110.dll;cufft64_10.dll""" -cmake_options "${{ env.cmake-options }}"
 
         mkdir -p '${{ github.workspace }}\dist'
         cp 'dist\*.whl' '${{ github.workspace }}\dist'
 
+    - name: Validate build output
+      shell: pwsh
+      run: |
+        python -m pip install twine
+        ls dist/
+
+        $WHEEL_PATTERN = "dist/itk_*cp3${{ matrix.python3-minor-version }}*win*.whl"
+        echo "Searching for wheels matching pattern ${WHEEL_PATTERN}"
+
+        python -m twine check ${WHEEL_PATTERN}
+
     - name: Publish Python package as GitHub Artifact
       uses: actions/upload-artifact@v3
       with:
-        name: WindowsWheel3.${{ matrix.python-version-minor }}-cuda116
+        name: WindowsWheel3${{ matrix.python3-minor-version }}-cuda116
         path: dist/*.whl
 
   publish-python-packages-to-pypi:

.github/workflows/build-test-package.yml

@@ -4,10 +4,10 @@ on: [push,pull_request]
 
 jobs:
   cxx-build-workflow:
-    uses: InsightSoftwareConsortium/ITKRemoteModuleBuildTestPackageAction/.github/workflows/build-test-cxx.yml@1514c2c529d3319976f82e48a9292be0297ffe9d
+    uses: InsightSoftwareConsortium/ITKRemoteModuleBuildTestPackageAction/.github/workflows/build-test-cxx.yml@v5.4.0
 
   python-build-workflow:
-    uses: InsightSoftwareConsortium/ITKRemoteModuleBuildTestPackageAction/.github/workflows/build-test-package-python.yml@1514c2c529d3319976f82e48a9292be0297ffe9d
+    uses: InsightSoftwareConsortium/ITKRemoteModuleBuildTestPackageAction/.github/workflows/build-test-package-python.yml@v5.4.0
     with:
       manylinux-platforms: '["_2_28-x64","2014-x64"]'
       cmake-options: '-DRTK_BUILD_APPLICATIONS:BOOL=OFF'

CMakeLists.txt

@@ -31,8 +31,8 @@ project(RTK)
 
 ## RTK Version
 set(RTK_VERSION_MAJOR "2")
-set(RTK_VERSION_MINOR "4")
-set(RTK_VERSION_PATCH "1")
+set(RTK_VERSION_MINOR "5")
+set(RTK_VERSION_PATCH "0")
 set(RTK_VERSION_STRING "${RTK_VERSION_MAJOR}.${RTK_VERSION_MINOR}")
 
 set(RTK_LIBRARIES RTK)

setup.py

@@ -12,7 +12,7 @@
 
 # Configure wheel name if CUDA is used
 wheel_name='itk-rtk'
-wheel_requirements=[r'itk>=5.3.0']
+wheel_requirements=[r'itk>=5.4rc1']
 
 # Extract cuda version from the RTK_CUDA_VERSION cmake option
 for arg in sys.argv:
@@ -24,7 +24,7 @@
 
 setup(
     name=wheel_name,
-    version='2.4.1',
+    version='2.5.0',
     author='RTK Consortium',
     author_email='rtk-users@openrtk.org',
     packages=['itk'],