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[DOC] update doc

[DOC] update doc #267

Workflow file for this run

name: CI
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
on:
pull_request:
branches: [ master ]
jobs:
run-tests:
runs-on: ubuntu-22.04
strategy:
matrix:
python-version: ['3.11', '3.10', '3.9', '3.8']
fail-fast: false
steps:
- name: Install Apptainer
env:
VERSION: 1.1.5
run: |
sudo apt-get update
sudo apt-get install -y wget
wget https://github.com/apptainer/apptainer/releases/download/v${VERSION}/apptainer_${VERSION}_amd64.deb
wget https://github.com/apptainer/apptainer/releases/download/v${VERSION}/apptainer-suid_${VERSION}_amd64.deb
sudo apt-get install --yes ./apptainer*
- name: Set Apptainer/Singularity environment variables
run: |
# Give reproenv the full path to apptainer, so it still works with `sudo`.
echo REPROENV_APPTAINER_PROGRAM=apptainer >> $GITHUB_ENV
echo APPTAINER_CACHEDIR=/dev/shm/$(whoami)/singularity >> $GITHUB_ENV
- uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install neurodocker
run: python -m pip install --editable .[dev]
- name: Run python tests
run: pytest --numprocesses auto
- name: Get code coverage
run: codecov