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After a lot of trial and error, I believe QGIS was not flushing or writing the edited features to disk after editing a layer. Export was working properly after 1) restarting QGiS, 2) Removing the edited layer from the map, 3) opening the gpkg in an external tool.
I was able to resolve the issue in the export tool by adding one line of code that refreshes all map layers in the document prior to making a copy of the gpkg for the export.
Taking the time to document this in case this kind strange behavior crops up in the future.
Data and view are there, but layers are not showing up in qgis.
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