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fix: Count proof obligations of loop headers (dafny-lang#3244)
This PR changes the verifier to increment the assertion count when it encounters a loop with non-free invariants. This increment was previously missing, which caused certain "loop invariant on entry" checks to be omitted (see dafny-lang#3243). Fixes dafny-lang#3243 <small>By submitting this pull request, I confirm that my contribution is made under the terms of the [MIT license](https://github.com/dafny-lang/dafny/blob/master/LICENSE.txt).</small>
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