Skip to content

Commit

Permalink
Try and make hidden steps work
Browse files Browse the repository at this point in the history
  • Loading branch information
stefpiatek committed Dec 7, 2023
1 parent 07efb76 commit 6105450
Showing 1 changed file with 11 additions and 2 deletions.
13 changes: 11 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -61,27 +61,36 @@ HTTP API to process messages from the `pacs` queue and populate the raw orthanc
</details>
2. <details><summary>If you haven't just installed the miniforge yourself, update your configuration</summary>
Edit `~/.bash_profile` to add `/gae/miniforge3/bin` to the PATH. for example

```
PATH=$PATH:$HOME/.local/bin:$HOME/bin:/gae/miniforge3/bin
```

Run the updated profile (or reconnect to the GAE) so that conda is in your PATH

```shell
source ~/.bash_profile
```

Initialise conda

```shell
conda init bash
```

Run the updated profile (or reconnect to the GAE) so that conda is in your PATH

```shell
source ~/.bash_profile
```
Activate an existing pixl enviroment

Activate an existing pixl environment

```shell
conda activate pixl_dev
```
</details>
3. <details><summary>Create an instance for the GAE if it doesn't already exist </summary>
3. <details><summary>Create an instance for the GAE if it doesn't already exist</summary>
Select a place for the deployment. On UCLH infrastructure this will be in `/gae`, so `/gae/pixl-dev` for example.

```shell
Expand Down

0 comments on commit 6105450

Please sign in to comment.