quip_reports

Docker Build and Run

cd to the quip_reports folder and run:

docker-compose up -d

Usage

Output directory: /data/reports

1. Print images

Prints a list of images for a given collection, with Collection, Study ID, Subject ID, Image ID, Date.

For all collections, pass "all" instead of "collection name".

Pass your quip credentials:

docker exec quip-reports images username password "collection name"

2. Print annotations

Prints list of images and their associated annotations, for a given collection. Output columns: Collection, Study ID, Subject ID, Image ID, Analysis type, Execution ID, Creator, Date.

Pass your quip credentials:

docker exec quip-reports annotations username password "collection name"