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Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes

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Raidionics

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Software to automatically segment brain tumors from pre- and post-operative MRI scans, compute their characteristics (e.g., volume, location), and generate a standardized report. The software was first introduced in the article "Brain tumor preoperative surgery imaging: models and software solutions for segmentation and standardized reporting", which has been published in Frontiers in Neurology.

The current version (i.e., v1.2) provides a more user-friendly graphical user interface. Version 1.0 corresponds to the software as it was when the article was submitted.

  • Please visit the wiki to know more about usage, use-cases, and access tutorials.
  • For any issue, please report them here.
  • Frequently asked questions (FAQs) can be found here.

Installation

An installer is provided for the three main Operating Systems: Windows (v10, 64-bit), Ubuntu Linux (>= 18.04), macOS (>= 10.15 Catalina), and macOS ARM (M1 chip). The software can be downloaded from here (see Assets).

NOTE: For reinstallation, it is recommended to manually delete the .raidionics/ folder located inside your home directory.

These steps are only needed to do once:

  1. Download the installer to your Operating System.
  2. Right click the downloaded file, click "open", and follow the instructions to install.
  3. Search for the software "Raidionics" and double click to run.

How to cite

If you are using Raidionics in your research, please use the following citation:

@article{10.3389/fneur.2022.932219,
    title={Preoperative Brain Tumor Imaging: Models and Software for Segmentation and Standardized Reporting},
    author={Bouget, David and Pedersen, André and Jakola, Asgeir S. and Kavouridis, Vasileios and Emblem, Kyrre E. and Eijgelaar, Roelant S. and Kommers, Ivar and Ardon, Hilko and Barkhof, Frederik and Bello, Lorenzo and Berger, Mitchel S. and Conti Nibali, Marco and Furtner, Julia and Hervey-Jumper, Shawn and Idema, Albert J. S. and Kiesel, Barbara and Kloet, Alfred and Mandonnet, Emmanuel and Müller, Domenique M. J. and Robe, Pierre A. and Rossi, Marco and Sciortino, Tommaso and Van den Brink, Wimar A. and Wagemakers, Michiel and Widhalm, Georg and Witte, Marnix G. and Zwinderman, Aeilko H. and De Witt Hamer, Philip C. and Solheim, Ole and Reinertsen, Ingerid},
    journal={Frontiers in Neurology},
    volume={13},
    year={2022},
    url={https://www.frontiersin.org/articles/10.3389/fneur.2022.932219},
    doi={10.3389/fneur.2022.932219},
    issn={1664-2295}
}

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