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@Sage-Bionetworks-Challenges

Sage Bionetworks Challenges

Sage Bionetworks hosts crowdsourcing challenges that examine questions in biology and medicine.

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  1. data-to-model-challenge-workflow data-to-model-challenge-workflow Public template

    This repository will contain data-to-model challenge workflows

    Common Workflow Language 2

  2. model-to-data-challenge-workflow model-to-data-challenge-workflow Public template

    This repository will contain model to data challenge workflows

    Common Workflow Language 6

  3. sample-model-templates sample-model-templates Public template

    Templates for creating a Docker model submission on Synapse.

    Dockerfile 1 1

  4. orca-evaluation-templates orca-evaluation-templates Public template

    Templates for creating evaluation scripts to be plugged into the Synapse ORCA workflow.

Repositories

Showing 10 of 67 repositories
  • Multi-seq-Data-Analysis-Post-Analysis Public

    Post-hoc analysis for scRNA-seq and scATAC-seq Data Analysis DREAM Challenge

    Sage-Bionetworks-Challenges/Multi-seq-Data-Analysis-Post-Analysis’s past year of commit activity
    HTML 1 0 0 0 Updated Sep 20, 2024
  • MIDI-B-De-identification Public
    Sage-Bionetworks-Challenges/MIDI-B-De-identification’s past year of commit activity
    Common Workflow Language 0 Apache-2.0 1 0 1 Updated Aug 15, 2024
  • brats2023 Public

    BraTS 2023+ Infrastructure

    Sage-Bionetworks-Challenges/brats2023’s past year of commit activity
    Common Workflow Language 4 Apache-2.0 1 0 0 Updated Aug 7, 2024
  • olfactory-mixtures-prediction Public

    DREAM Olfactory Mixtures Prediction Challenge infrastrcture

    Sage-Bionetworks-Challenges/olfactory-mixtures-prediction’s past year of commit activity
    Common Workflow Language 0 Apache-2.0 0 0 0 Updated Aug 7, 2024
  • cnb-tools Public

    Convenience tools/functions for challenges and benchmarking on Synapse.org

    Sage-Bionetworks-Challenges/cnb-tools’s past year of commit activity
    Python 2 Apache-2.0 0 9 0 Updated Jul 15, 2024
  • pegs-evaluation Public

    Evaluation scripts for the PEGS challenge

    Sage-Bionetworks-Challenges/pegs-evaluation’s past year of commit activity
    Python 1 1 0 0 Updated Jul 10, 2024
  • BraTs-Validate-Users Public Forked from rrchai/BraTs-Validate-Users

    Tool to monitor Google Form responses collected in a Google Sheet

    Sage-Bionetworks-Challenges/BraTs-Validate-Users’s past year of commit activity
    R 0 2 0 0 Updated May 4, 2024
  • orca-evaluation-templates Public template

    Templates for creating evaluation scripts to be plugged into the Synapse ORCA workflow.

    Sage-Bionetworks-Challenges/orca-evaluation-templates’s past year of commit activity
    0 0 0 0 Updated May 2, 2024
  • sample-model-templates Public template

    Templates for creating a Docker model submission on Synapse.

    Sage-Bionetworks-Challenges/sample-model-templates’s past year of commit activity
    Dockerfile 1 1 0 0 Updated Apr 17, 2024
  • Multi-seq-Data-Analysis-Baseline Public

    Baseline model for scRNA-seq and scATAC-seq Data Analysis Dream Challenge

    Sage-Bionetworks-Challenges/Multi-seq-Data-Analysis-Baseline’s past year of commit activity
    R 0 0 0 0 Updated Apr 9, 2024
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