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SciML · Oct 17, 2024 · 6d028c9 · 6d028c9
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diff --git a/dev/.documenter-siteinfo.json b/dev/.documenter-siteinfo.json
@@ -1 +1 @@
-{"documenter":{"julia_version":"1.11.1","generation_timestamp":"2024-10-16T22:00:57","documenter_version":"1.7.0"}}
+{"documenter":{"julia_version":"1.11.1","generation_timestamp":"2024-10-17T18:22:54","documenter_version":"1.7.0"}}
diff --git a/dev/assets/Manifest.toml b/dev/assets/Manifest.toml
@@ -350,9 +350,9 @@ version = "1.15.1"
 
 [[deps.DifferentiationInterface]]
 deps = ["ADTypes", "LinearAlgebra"]
-git-tree-sha1 = "47eb93cacfd73e49594f5eb073ae48f98dc826f3"
+git-tree-sha1 = "c7fcd1d8b86dfd883eebd7a7ca31093e92d73ba2"
 uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63"
-version = "0.6.10"
+version = "0.6.15"
 
  [deps.DifferentiationInterface.extensions]
  DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore"
@@ -392,9 +392,9 @@ version = "0.6.10"
 
 [[deps.DispatchDoctor]]
 deps = ["MacroTools", "Preferences"]
-git-tree-sha1 = "19eec8ee5cde1c10aa5e5e0f25d10a3b4c8f8f12"
+git-tree-sha1 = "810cae95ca4db1c563be2d7d38fa9b7289d302db"
 uuid = "8d63f2c5-f18a-4cf2-ba9d-b3f60fc568c8"
-version = "0.4.15"
+version = "0.4.16"
 weakdeps = ["ChainRulesCore", "EnzymeCore"]
 
  [deps.DispatchDoctor.extensions]
@@ -705,9 +705,9 @@ version = "1.0.0"
 
 [[deps.JLLWrappers]]
 deps = ["Artifacts", "Preferences"]
-git-tree-sha1 = "f389674c99bfcde17dc57454011aa44d5a260a40"
+git-tree-sha1 = "be3dc50a92e5a386872a493a10050136d4703f9b"
 uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210"
-version = "1.6.0"
+version = "1.6.1"
 
 [[deps.JSON]]
 deps = ["Dates", "Mmap", "Parsers", "Unicode"]
@@ -741,14 +741,9 @@ uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7"
 version = "0.9.6"
 
 [[deps.LaTeXStrings]]
-git-tree-sha1 = "50901ebc375ed41dbf8058da26f9de442febbbec"
+git-tree-sha1 = "dda21b8cbd6a6c40d9d02a73230f9d70fed6918c"
 uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f"
-version = "1.3.1"
-
-[[deps.LambertW]]
-git-tree-sha1 = "c5ffc834de5d61d00d2b0e18c96267cffc21f648"
-uuid = "984bce1d-4616-540c-a9ee-88d1112d94c9"
-version = "0.4.6"
+version = "1.4.0"
 
 [[deps.Latexify]]
 deps = ["Format", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Requires"]
@@ -983,9 +978,9 @@ version = "1.11.0"
 
 [[deps.ModelingToolkit]]
 deps = ["AbstractTrees", "ArrayInterface", "BlockArrays", "Combinatorics", "Compat", "ConstructionBase", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "DiffRules", "Distributed", "Distributions", "DocStringExtensions", "DomainSets", "DynamicQuantities", "ExprTools", "Expronicon", "FindFirstFunctions", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "Graphs", "InteractiveUtils", "JuliaFormatter", "JumpProcesses", "Latexify", "Libdl", "LinearAlgebra", "MLStyle", "NaNMath", "NonlinearSolve", "OffsetArrays", "OrderedCollections", "PrecompileTools", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "SciMLStructures", "Serialization", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils", "Symbolics", "URIs", "UnPack", "Unitful"]
-git-tree-sha1 = "6bd76441412fece207dd24dfa016d0d6e89cb8c1"
+git-tree-sha1 = "0d145af02e12be68c04412f31abfdadc69a2e173"
 uuid = "961ee093-0014-501f-94e3-6117800e7a78"
-version = "9.45.0"
+version = "9.46.1"
 
  [deps.ModelingToolkit.extensions]
  MTKBifurcationKitExt = "BifurcationKit"
@@ -1016,9 +1011,9 @@ version = "0.5.7"
 
 [[deps.MutableArithmetics]]
 deps = ["LinearAlgebra", "SparseArrays", "Test"]
-git-tree-sha1 = "3eba928678787843e504c153a9b8e80d7d73ab17"
+git-tree-sha1 = "90077f1e79de8c9c7c8a90644494411111f4e07b"
 uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0"
-version = "1.5.0"
+version = "1.5.2"
 
 [[deps.NLSolversBase]]
 deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"]
@@ -1579,9 +1574,9 @@ version = "7.7.0+0"
 
 [[deps.SymbolicIndexingInterface]]
 deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"]
-git-tree-sha1 = "0225f7c62f5f78db35aae6abb2e5cabe38ce578f"
+git-tree-sha1 = "4bc96df5d71515b1cb86dd626915f06f4c0d46f5"
 uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5"
-version = "0.3.31"
+version = "0.3.33"
 
 [[deps.SymbolicLimits]]
 deps = ["SymbolicUtils"]
@@ -1591,9 +1586,9 @@ version = "0.2.2"
 
 [[deps.SymbolicUtils]]
 deps = ["AbstractTrees", "ArrayInterface", "Bijections", "ChainRulesCore", "Combinatorics", "ConstructionBase", "DataStructures", "DocStringExtensions", "DynamicPolynomials", "IfElse", "LinearAlgebra", "MultivariatePolynomials", "NaNMath", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "TermInterface", "TimerOutputs", "Unityper"]
-git-tree-sha1 = "3927e02dc7648a45ec6aa592bcd8374094a44740"
+git-tree-sha1 = "04e9157537ba51dad58336976f8d04b9ab7122f0"
 uuid = "d1185830-fcd6-423d-90d6-eec64667417b"
-version = "3.7.1"
+version = "3.7.2"
 
  [deps.SymbolicUtils.extensions]
  SymbolicUtilsLabelledArraysExt = "LabelledArrays"
@@ -1604,10 +1599,10 @@ version = "3.7.1"
  ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
 
 [[deps.Symbolics]]
-deps = ["ADTypes", "ArrayInterface", "Bijections", "CommonWorldInvalidations", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "Primes", "RecipesBase", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArraysCore", "SymbolicIndexingInterface", "SymbolicLimits", "SymbolicUtils", "TermInterface"]
-git-tree-sha1 = "6a7c7cd9bd8c051877a5a29fb597b18362dbc4e4"
+deps = ["ADTypes", "ArrayInterface", "Bijections", "CommonWorldInvalidations", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "IfElse", "LaTeXStrings", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "Primes", "RecipesBase", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArraysCore", "SymbolicIndexingInterface", "SymbolicLimits", "SymbolicUtils", "TermInterface"]
+git-tree-sha1 = "aa3218c29b81384531631b2e5354fdf034a13ec2"
 uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7"
-version = "6.13.1"
+version = "6.14.1"
 
  [deps.Symbolics.extensions]
  SymbolicsForwardDiffExt = "ForwardDiff"

diff --git a/dev/fundamentals/FAQ/index.html b/dev/fundamentals/FAQ/index.html
diff --git a/dev/index.html b/dev/index.html
diff --git a/dev/interfaces/Algorithms/index.html b/dev/interfaces/Algorithms/index.html
diff --git a/dev/interfaces/Array_and_Number/index.html b/dev/interfaces/Array_and_Number/index.html
diff --git a/dev/interfaces/Common_Keywords/index.html b/dev/interfaces/Common_Keywords/index.html
diff --git a/dev/interfaces/Differentiation/index.html b/dev/interfaces/Differentiation/index.html
@@ -25,4 +25,4 @@
 
 function _concrete_solve_forward(args...; kwargs...)
  error(&quot;No sensitivity rules exist. Check that you added `using DiffEqSensitivity`&quot;)
-end</code></pre><p>The sensitivity mechanism is kept in a separate package because of the high dependency and load time cost introduced by the automatic differentiation libraries. Different choices of automatic differentiation are then selected by the <code>sensealg</code> keyword argument in <code>solve</code>, which is made into a positional argument in the <code>_solve_adjoint</code> and other functions in order to allow dispatch.</p><h2 id="SensitivityADPassThrough"><a class="docs-heading-anchor" href="#SensitivityADPassThrough">SensitivityADPassThrough</a><a id="SensitivityADPassThrough-1"></a><a class="docs-heading-anchor-permalink" href="#SensitivityADPassThrough" title="Permalink"></a></h2><p>The special sensitivity algorithm <code>SensitivityADPassThrough</code> is used to ignore the internal sensitivity dispatches and instead do automatic differentiation directly through the solver. Generally this <code>sensealg</code> is only used internally.</p><h2 id="Note-about-ForwardDiff"><a class="docs-heading-anchor" href="#Note-about-ForwardDiff">Note about ForwardDiff</a><a id="Note-about-ForwardDiff-1"></a><a class="docs-heading-anchor-permalink" href="#Note-about-ForwardDiff" title="Permalink"></a></h2><p>ForwardDiff does not use ChainRules.jl and thus it completely ignores the special handling.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../Common_Keywords/">« Common Keyword Arguments</a><a class="docs-footer-nextpage" href="../PDE/">The PDE Definition Interface »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Wednesday 16 October 2024 22:00">Wednesday 16 October 2024</span>. Using Julia version 1.11.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
+end</code></pre><p>The sensitivity mechanism is kept in a separate package because of the high dependency and load time cost introduced by the automatic differentiation libraries. Different choices of automatic differentiation are then selected by the <code>sensealg</code> keyword argument in <code>solve</code>, which is made into a positional argument in the <code>_solve_adjoint</code> and other functions in order to allow dispatch.</p><h2 id="SensitivityADPassThrough"><a class="docs-heading-anchor" href="#SensitivityADPassThrough">SensitivityADPassThrough</a><a id="SensitivityADPassThrough-1"></a><a class="docs-heading-anchor-permalink" href="#SensitivityADPassThrough" title="Permalink"></a></h2><p>The special sensitivity algorithm <code>SensitivityADPassThrough</code> is used to ignore the internal sensitivity dispatches and instead do automatic differentiation directly through the solver. Generally this <code>sensealg</code> is only used internally.</p><h2 id="Note-about-ForwardDiff"><a class="docs-heading-anchor" href="#Note-about-ForwardDiff">Note about ForwardDiff</a><a id="Note-about-ForwardDiff-1"></a><a class="docs-heading-anchor-permalink" href="#Note-about-ForwardDiff" title="Permalink"></a></h2><p>ForwardDiff does not use ChainRules.jl and thus it completely ignores the special handling.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../Common_Keywords/">« Common Keyword Arguments</a><a class="docs-footer-nextpage" href="../PDE/">The PDE Definition Interface »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Thursday 17 October 2024 18:22">Thursday 17 October 2024</span>. Using Julia version 1.11.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>