dataset/crop/bugfix/up-updated-extent-for-cropped-raster

[MAfarrag]

gdal.Wrap Error

correct the error when using the cutline in the gdal.wrap function to crop raster with a polygon, the error make the cropped raster has an array the same size as the old raster array (before cropping), this leads to a bug in calculating statistics and plotting.

The error is described in details in issue #74

• Fixes # (issue)
• Extent of cropped raster is wrong #74

Type of change

Check relevant points.

• Bug fix (non-breaking change which fixes an issue)
• New feature (non-breaking change which adds functionality)
• Breaking change (fix or feature that would cause existing functionality to not work as expected)
• This change requires a documentation update

How Has This Been Tested?

• Please describe the tests that you ran to verify your changes.
  The test crops amulti-band raster with a polygon and trigger the gdal.wrap function with a False cutline parameter which result in the original array staying the same (only the values inside are cropped) and the array is full of the no_data_value, then the _crop_with_polygon_warp fuction triggers the correction function correct_wrap_cutline_error.

• test_dataset::TestCropWithPolygon::test_by_warp_touch_multi_band

Checklist:

• updated version number in setup.py/pyproject.toml.
• updated environment.yml and the lock file.
• added changes to History.rst.
• updated the latest version in README file.
• I have added tests that prove my fix is effective or that my feature works.
• New and existing unit tests pass locally with my changes.
• documentation are updated.

[codecov]

Codecov Report

Attention: 4 lines in your changes are missing coverage. Please review.

Comparison is base (d645dd6) 83.75% compared to head (ac8d361) 84.50%.

Files	Patch %	Lines
pyramids/dataset.py	89.47%	4 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main      #75      +/-   ##
==========================================
+ Coverage   83.75%   84.50%   +0.74%     
==========================================
  Files           7        7              
  Lines        2118     2143      +25     
==========================================
+ Hits         1774     1811      +37     
+ Misses        344      332      -12     

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