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@Shao-Group

Shao Group

Research Group in Computational Biology at Penn State

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  1. lecture-notes-for-algorithms lecture-notes-for-algorithms Public

    TeX 25 1

  2. cmpsc465-fa20 cmpsc465-fa20 Public

    Python 19 40

  3. scallop2 scallop2 Public

    C++ 9 7

  4. subseqhash subseqhash Public

    C++ 8

  5. rnabridge-align rnabridge-align Public

    rnabridge-align is an efficient tool to bridge paired-end RNA-seq reads

    C++ 5 1

  6. aletsch aletsch Public

    Assembler for multiple RNA-seq samples

    C++ 4 1

Repositories

Showing 10 of 40 repositories
  • TENNIS Public
    Shao-Group/TENNIS’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Nov 6, 2024
  • TENNIS-test Public
    Shao-Group/TENNIS-test’s past year of commit activity
    Python 0 0 0 0 Updated Nov 6, 2024
  • dcj-sat Public
    Shao-Group/dcj-sat’s past year of commit activity
    C++ 0 0 0 0 Updated Nov 3, 2024
  • beaver-test Public
    Shao-Group/beaver-test’s past year of commit activity
    Python 0 0 0 0 Updated Nov 3, 2024
  • EquiRep Public
    Shao-Group/EquiRep’s past year of commit activity
    C++ 0 0 0 0 Updated Nov 2, 2024
  • beaver Public
    Shao-Group/beaver’s past year of commit activity
    C++ 0 BSD-3-Clause 0 0 0 Updated Nov 2, 2024
  • EquiRep-test Public
    Shao-Group/EquiRep-test’s past year of commit activity
    C++ 0 0 0 0 Updated Oct 31, 2024
  • scallop2 Public
    Shao-Group/scallop2’s past year of commit activity
    C++ 9 BSD-3-Clause 7 4 0 Updated Oct 31, 2024
  • aletsch Public

    Assembler for multiple RNA-seq samples

    Shao-Group/aletsch’s past year of commit activity
    C++ 4 BSD-3-Clause 1 1 0 Updated Oct 31, 2024
  • SubseqHash2 Public

    Fast, SIMD-accelerated, multi-set seeding algorithm for error-prone sequences

    Shao-Group/SubseqHash2’s past year of commit activity
    C++ 4 BSD-3-Clause 0 0 0 Updated Oct 29, 2024
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