v2.0.0-rc.3

What's changed

• [feat!] Changed TSV headers for reported metrics #61
• [feat!] Barcodes are now delimited in reported metrics #62
• [bugfix] Fixed edge case for handling distances and min_delta parameter for matchers #54

Full Changelog: v1.2.0...v2.0.0-rc.3

v1.2.0

What's Changed

• [feat] use lane from sample metadata in filename or --lanes by @nh13 in #42
• [feat] allow the auto-detected read structure to be overriden by @nh13 in #45
• Bugfix/specify lane ordinal sorting by @nh13 in #46
• [feat] update the ordinal after coalescing by @nh13 in #47
• [bugfix] the output undetermined file should be named based on --lane by @nh13 in #48

Full Changelog: v1.1.2...v1.2.0

v1.1.2

What's Changed

• Use the rust-toolchain.toml in github actions by @nh13 in #40
• [doc] use --locked with cargo install by @nh13 in #41
• [ci] add support for building static binaries in GitHub Actions by @nh13 in #43

Full Changelog: v1.1.1...v1.1.2

v1.1.1

What's Changed

• Bump bumpalo from 3.10.0 to 3.12.0 by @dependabot in #37
• docs: synchronize argument ordering in the README and usage/help by @nh13 in #38
• Change run_metrics.tsv to metrics.tsv in the README by @nh13 in #39

New Contributors

• @dependabot made their first contribution in #37

Full Changelog: v1.1.0...v1.1.1

v1.1.0

What's Changed

• Update the output filename pattern by @nh13 in #22
• Adding support for Singular Genomics' sample sheet by @nh13 in #21
• If project exists in the Sample Sheet, append to the output directory by @nh13 in #23
• Input can be a path prefix by @nh13 in #24
• Support demultiplexing across multiple lanes by @nh13 in #25
• Check that read pairs have the same name by @nh13 in #27
• Add an option to use the sample barcode in the FASTQ header by @nh13 in #28
• Improve documentation of the order of auto-detected reads by @nh13 in #29
• Add an option to specify the file name prefix for all metric f… by @nh13 in #30
• Add support for project level metrics by @nh13 in #31
• Handle when --fastqs is specified on the CLI while CLI options are also in a sample sheet by @nh13 in #33
• Only check read structures for sample barcodes if demultiple… by @nh13 in #35
• Add an option to only process specific lanes by @nh13 in #36

Full Changelog: v1.0.0...v1.1.0

v1.0.0

Initial release of sgdemux!