This repo contains scripts I wrote for processing .log files coming from our EcoMapper AUV (which is basically an Iver2). These have last been tested and adapted for Matlab R2018a pre-release.
To map/plot all data from all EcoMapper missions, use
map_all.m / plot_all.m
which will collect data from all missions in the specified folder,
and plot 2D and 3D figures (plot_all) or a top-down view (map_all).
E.g. to plot all sensor data from one day at the Puddingstone reservoir:
plot_all('~/data_em/puddingstone_20180419');
map_all('~/data_em/puddingstone_20180419');
To map/plot one type of data from all EcoMapper missions, use
map_data_from_ecomapper_by_type / plot_em_by_type
E.g. to plot only Chlorophyll data from one day at Puddingstone:
plot_em_by_type('chl','~/data_em/puddingstone_20180419')
To map/plot one type of data for one day of EM missions,
EITHER use map_data_from_ecomapper_by_type_and_date / plot_em_type_date
or use map_data_from_ecomapper_by_type / plot_em_by_type / map_all / plot_all
and change the data_prefix_path to the specific log file.
(Haven't tested this in a while.. :) )
To create an interpolated data plot, run
map_interpolated_data_from_ecomapper_by_type using any data type, for example water_depth:
map_interpolated_data_from_ecomapper_by_type('water_depth','~/data_em/puddingstone_20180419')
To create an interpolated bathymetry plot, you can also use the shortcut of running the map_bathymetry_from_ecomapper script.
Examples:
map_data_from_ecomapper_by_type('chl','','~/data_em/puddingstone_20180419')
map_data_from_ecomapper_by_type_and_date('chl',19,4,2018,'','~/data_em');
- all the mapping scripts will use the mapping toolbox, if available, to plot on top of a map (last tested for Matlab 2012)
- The following scripts can also be used interactively - they will open a dialog window where you can select the folder that contains the log files to be plotted:
plot_all*,map_all,plot_em_by_type*,curtainplot_sensors_subset*