Skip to content

Commit

Permalink
Document --addsuffix option in manual
Browse files Browse the repository at this point in the history
  • Loading branch information
kbseah committed Aug 26, 2021
1 parent a6ad2e3 commit ee14639
Showing 1 changed file with 7 additions and 5 deletions.
12 changes: 7 additions & 5 deletions docs/insert.md
Original file line number Diff line number Diff line change
Expand Up @@ -29,11 +29,13 @@ If the genome has existing annotations in a GFF3 feature table, this can be
supplied to the `--featuregff` option. The coordinates of the annotations will
be updated after the insertion of IESs, and other annotation fields remain
unchanged. If a feature is interrupted by one or more IESs, the feature will be
split into two or more features, where the ID of the original feature is
suffixed with `.seg_0`, `.seg_1` et seq. to distinguish them. The updating of
an existing feature table is only available in insert mode, because the
deletion or truncation of an existing feature annotation will require manual
intervention or curation.
split into two or more features. If the feature contains an ID attribute and
the option `--addsuffix` is chosen, then the ID of the original feature is
suffixed with `.seg_0`, `.seg_1` et seq. to distinguish the different segments
split from the original entry. By default the ID field is unchanged. The
updating of an existing feature table is only available in insert mode, because
the deletion or truncation of an existing feature annotation will require
manual intervention or curation.

Output
------
Expand Down

0 comments on commit ee14639

Please sign in to comment.