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Some reaction pairs are very similar, but with different stoichiometry, which is suspicious:
We should figure out which is right.
The third column is if they have the same GPR.
example (same GPR):
'2 ATP[c] + 2 H2O[c] + sulfate[c] => 2 ADP[c] + 2 H+[c] + 2 Pi[c] + sulfate[s]' 'ATP[c] + H2O[c] + sulfate[c] => ADP[c] + H+[c] + Pi[c] + sulfate[s]'
MAR04910, MAR04411, and MAR04912 were addressed in #568/#600. MAR06057 was not mentioned, but MAR04411 was removed in #600, and MAR04411 was the only potential duplicate of MAR06057 listed here.
MAR05295 was removed in #581
MAR06406 and MAR01483 were removed in #706
I haven't investigated any of the others beyond determining that no other issues or pull requests or anything mention them
Description of the issue:
Some reaction pairs are very similar, but with different stoichiometry, which is suspicious:
We should figure out which is right.
The third column is if they have the same GPR.
example (same GPR):
'2 ATP[c] + 2 H2O[c] + sulfate[c] => 2 ADP[c] + 2 H+[c] + 2 Pi[c] + sulfate[s]' 'ATP[c] + H2O[c] + sulfate[c] => ADP[c] + H+[c] + Pi[c] + sulfate[s]'
Expected feature/value/output:
How the reaction/metabolite/gene/simulation result should look (cite literature if needed). PLEASE DELETE THIS LINE.
Current feature/value/output:
How the reaction/metabolite/gene/simulation actually looks in the
main
branch. PLEASE DELETE THIS LINE.Reproducing these results:
Please attach any Matlab code used . PLEASE DELETE THIS LINE.
I hereby confirm that I have:
main
branch of the repositoryNote: replace [ ] with [X] to check the box. PLEASE DELETE THIS LINE
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