Removed BAT files (kept on BAT branch)

NAMESPACE

@@ -3,7 +3,6 @@ import(ape)
 import(stats)
 
 importFrom("ade4", "randtest", "as.randtest")
-# importFrom("BAT", "alpha")
 importFrom("castor", "get_subtree_with_tips", "get_all_pairwise_distances", "get_all_distances_to_root", "asr_mk_model")
 importFrom("Claddis", "calculate_morphological_distances")
 importFrom("ellipse", "ellipse")
@@ -54,7 +53,6 @@ export(test.metric)
 ##disparity metrics
 export(ancestral.dist)
 export(angles)
-# export(BAT.metric)
 export(centroids)
 export(convhull.volume)
 export(convhull.surface)
@@ -103,7 +101,6 @@ export(randtest.dispRity)
 export(as.covar)
 export(axis.covar)
 export(combine.subsets)
-# export(dispRity.BAT)
 export(extinction.subsets)
 export(fill.dispRity)
 export(get.disparity)

NEWS.md

@@ -9,9 +9,6 @@ dispRity v1.8.11 (2024-06-06)
  <!-- TODO: make a MCMCglmm related standalone vignette -->
  <!-- TODO: make a morpho disparity (Claddis) standalone vignette -->
  <!-- TODO: New argument to the `boot.matrix` function: `boot.dimensions` for bootstrapping the rows of the matrix as well (can be either `"full"` or `"single"`).  -->
-<!--  * New interface for the `BAT` package with new generic metric function `BAT.metric`. This function allows to use any metric from the `BAT` function as a metric for `dispRity` using the synthax: `dispRity(data, metric = BAT.metric, BAT.fun = "name", ...)`
- * New utility function: `dispRity.BAT` for converting some parts of `dispRity` objects into `BAT` arguments.
- -->    <!-- TODO: handle bootstraps automatically -->
  * *New metric*: `count.neighbours` to count the number of neighbours for each elements within a certain radius (thanks to Rob MacDonald for the suggestion).
     <!-- TODO: also add to manual -->