Update manifest files

TuringLang · Jul 8, 2023 · 02066f9 · 02066f9
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diff --git a/tutorials/00-introduction/Manifest.toml b/tutorials/00-introduction/Manifest.toml
diff --git a/tutorials/01-gaussian-mixture-model/Manifest.toml b/tutorials/01-gaussian-mixture-model/Manifest.toml
diff --git a/tutorials/02-logistic-regression/Manifest.toml b/tutorials/02-logistic-regression/Manifest.toml
diff --git a/tutorials/03-bayesian-neural-network/Manifest.toml b/tutorials/03-bayesian-neural-network/Manifest.toml
diff --git a/tutorials/04-hidden-markov-model/Manifest.toml b/tutorials/04-hidden-markov-model/Manifest.toml
diff --git a/tutorials/05-linear-regression/Manifest.toml b/tutorials/05-linear-regression/Manifest.toml
diff --git a/tutorials/06-infinite-mixture-model/Manifest.toml b/tutorials/06-infinite-mixture-model/Manifest.toml
diff --git a/tutorials/07-poisson-regression/Manifest.toml b/tutorials/07-poisson-regression/Manifest.toml
diff --git a/tutorials/08-multinomial-logistic-regression/Manifest.toml b/tutorials/08-multinomial-logistic-regression/Manifest.toml
diff --git a/tutorials/09-variational-inference/Manifest.toml b/tutorials/09-variational-inference/Manifest.toml
diff --git a/tutorials/10-bayesian-differential-equations/Manifest.toml b/tutorials/10-bayesian-differential-equations/Manifest.toml
diff --git a/tutorials/11-probabilistic-pca/Manifest.toml b/tutorials/11-probabilistic-pca/Manifest.toml
diff --git a/tutorials/12-gaussian-process/Manifest.toml b/tutorials/12-gaussian-process/Manifest.toml
diff --git a/tutorials/13-seasonal-time-series/Manifest.toml b/tutorials/13-seasonal-time-series/Manifest.toml
diff --git a/tutorials/14-minituring/Manifest.toml b/tutorials/14-minituring/Manifest.toml
@@ -2,15 +2,15 @@
 
 [[AbstractFFTs]]
 deps = ["ChainRulesCore", "LinearAlgebra"]
-git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0"
+git-tree-sha1 = "cad4c758c0038eea30394b1b671526921ca85b21"
 uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c"
-version = "1.3.1"
+version = "1.4.0"
 
 [[AbstractMCMC]]
 deps = ["BangBang", "ConsoleProgressMonitor", "Distributed", "LogDensityProblems", "Logging", "LoggingExtras", "ProgressLogging", "Random", "StatsBase", "TerminalLoggers", "Transducers"]
-git-tree-sha1 = "a21654aa796bcc993284dace0d17d1022774c0a3"
+git-tree-sha1 = "87e63dcb990029346b091b170252f3c416568afc"
 uuid = "80f14c24-f653-4e6a-9b94-39d6b0f70001"
-version = "4.4.1"
+version = "4.4.2"
 
 [[AbstractPPL]]
 deps = ["AbstractMCMC", "DensityInterface", "Random", "Setfield", "SparseArrays"]
@@ -63,9 +63,9 @@ uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
 
 [[ArrayInterface]]
 deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"]
-git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641"
+git-tree-sha1 = "f83ec24f76d4c8f525099b2ac475fc098138ec31"
 uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9"
-version = "7.4.8"
+version = "7.4.11"
 
 [[ArrayInterfaceCore]]
 deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"]
@@ -133,9 +133,9 @@ version = "0.5.1"
 
 [[ChainRules]]
 deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"]
-git-tree-sha1 = "61549d9b52c88df34d21bd306dba1d43bb039c87"
+git-tree-sha1 = "2afc496e94d15a1af5502625246d172361542133"
 uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2"
-version = "1.51.0"
+version = "1.52.0"
 
 [[ChainRulesCore]]
 deps = ["Compat", "LinearAlgebra", "SparseArrays"]
@@ -144,10 +144,10 @@ uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
 version = "1.16.0"
 
 [[ChangesOfVariables]]
-deps = ["LinearAlgebra", "Test"]
-git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589"
+deps = ["InverseFunctions", "LinearAlgebra", "Test"]
+git-tree-sha1 = "2fba81a302a7be671aefe194f0525ef231104e7f"
 uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0"
-version = "0.1.7"
+version = "0.1.8"
 
 [[Combinatorics]]
 git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860"
@@ -167,9 +167,9 @@ version = "0.3.0"
 
 [[Compat]]
 deps = ["Dates", "LinearAlgebra", "UUIDs"]
-git-tree-sha1 = "7a60c856b9fa189eb34f5f8a6f6b5529b7942957"
+git-tree-sha1 = "4e88377ae7ebeaf29a047aa1ee40826e0b708a5d"
 uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
-version = "4.6.1"
+version = "4.7.0"
 
 [[CompilerSupportLibraries_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -204,9 +204,9 @@ version = "1.15.0"
 
 [[DataStructures]]
 deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
-git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0"
+git-tree-sha1 = "cf25ccb972fec4e4817764d01c82386ae94f77b4"
 uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
-version = "0.18.13"
+version = "0.18.14"
 
 [[DataValueInterfaces]]
 git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6"
@@ -250,9 +250,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
 
 [[Distributions]]
 deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"]
-git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b"
+git-tree-sha1 = "e76a3281de2719d7c81ed62c6ea7057380c87b1d"
 uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
-version = "0.25.95"
+version = "0.25.98"
 
 [[DistributionsAD]]
 deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"]
@@ -300,9 +300,9 @@ version = "0.1.9"
 
 [[FFTW]]
 deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"]
-git-tree-sha1 = "06bf20fcecd258eccf9a6ef7b99856a4dfe7b64c"
+git-tree-sha1 = "b4fbdd20c889804969571cc589900803edda16b7"
 uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341"
-version = "1.7.0"
+version = "1.7.1"
 
 [[FFTW_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@@ -357,9 +357,9 @@ version = "0.1.5"
 
 [[HypergeometricFunctions]]
 deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"]
-git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f"
+git-tree-sha1 = "ce7ea9cc5db29563b1fe20196b6d23ab3b111384"
 uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a"
-version = "0.3.17"
+version = "0.3.18"
 
 [[IRTools]]
 deps = ["InteractiveUtils", "MacroTools", "Test"]
@@ -402,9 +402,9 @@ version = "0.7.4"
 
 [[InverseFunctions]]
 deps = ["Test"]
-git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67"
+git-tree-sha1 = "edd1c1ac227767c75e8518defdf6e48dbfa7c3b0"
 uuid = "3587e190-3f89-42d0-90ee-14403ec27112"
-version = "0.1.9"
+version = "0.1.10"
 
 [[InvertedIndices]]
 git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038"
@@ -434,9 +434,9 @@ version = "1.4.1"
 
 [[KernelAbstractions]]
 deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"]
-git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4"
+git-tree-sha1 = "b48617c5d764908b5fac493cd907cf33cc11eec1"
 uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c"
-version = "0.9.4"
+version = "0.9.6"
 
 [[KernelDensity]]
 deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"]
@@ -446,15 +446,15 @@ version = "0.6.7"
 
 [[LLVM]]
 deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"]
-git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818"
+git-tree-sha1 = "8695a49bfe05a2dc0feeefd06b4ca6361a018729"
 uuid = "929cbde3-209d-540e-8aea-75f648917ca0"
-version = "5.2.0"
+version = "6.1.0"
 
 [[LLVMExtra_jll]]
 deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"]
-git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217"
+git-tree-sha1 = "c35203c1e1002747da220ffc3c0762ce7754b08c"
 uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab"
-version = "0.0.22+0"
+version = "0.0.23+0"
 
 [[LRUCache]]
 git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634"
@@ -540,9 +540,9 @@ version = "0.2.6"
 
 [[MKL_jll]]
 deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"]
-git-tree-sha1 = "2ce8695e1e699b68702c03402672a69f54b8aca9"
+git-tree-sha1 = "154d7aaa82d24db6d8f7e4ffcfe596f40bff214b"
 uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7"
-version = "2022.2.0+0"
+version = "2023.1.0+0"
 
 [[MLJModelInterface]]
 deps = ["Random", "ScientificTypesBase", "StatisticalTraits"]
@@ -615,9 +615,9 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
 
 [[OffsetArrays]]
 deps = ["Adapt"]
-git-tree-sha1 = "82d7c9e310fe55aa54996e6f7f94674e2a38fcb4"
+git-tree-sha1 = "2ac17d29c523ce1cd38e27785a7d23024853a4bb"
 uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881"
-version = "1.12.9"
+version = "1.12.10"
 
 [[OpenLibm_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -810,9 +810,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
 
 [[SpecialFunctions]]
 deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"]
-git-tree-sha1 = "ef28127915f4229c971eb43f3fc075dd3fe91880"
+git-tree-sha1 = "7beb031cf8145577fbccacd94b8a8f4ce78428d3"
 uuid = "276daf66-3868-5448-9aa4-cd146d93841b"
-version = "2.2.0"
+version = "2.3.0"
 
 [[SplittablesBase]]
 deps = ["Setfield", "Test"]
@@ -822,9 +822,9 @@ version = "0.1.15"
 
 [[StaticArrays]]
 deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"]
-git-tree-sha1 = "832afbae2a45b4ae7e831f86965469a24d1d8a83"
+git-tree-sha1 = "0da7e6b70d1bb40b1ace3b576da9ea2992f76318"
 uuid = "90137ffa-7385-5640-81b9-e52037218182"
-version = "1.5.26"
+version = "1.6.0"
 
 [[StaticArraysCore]]
 git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a"
@@ -906,15 +906,15 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 
 [[Tracker]]
 deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"]
-git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f"
+git-tree-sha1 = "92364c27aa35c0ee36e6e010b704adaade6c409c"
 uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"
-version = "0.2.25"
+version = "0.2.26"
 
 [[Transducers]]
 deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"]
-git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37"
+git-tree-sha1 = "a66fb81baec325cf6ccafa243af573b031e87b00"
 uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999"
-version = "0.4.76"
+version = "0.4.77"
 
 [[Turing]]
 deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "DiffResults", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker", "ZygoteRules"]
@@ -941,9 +941,9 @@ version = "0.2.1"
 
 [[UnsafeAtomicsLLVM]]
 deps = ["LLVM", "UnsafeAtomics"]
-git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175"
+git-tree-sha1 = "323e3d0acf5e78a56dfae7bd8928c989b4f3083e"
 uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249"
-version = "0.1.2"
+version = "0.1.3"
 
 [[WoodburyMatrices]]
 deps = ["LinearAlgebra", "SparseArrays"]