Skip to content

Commit

Permalink
Update manifest files
Browse files Browse the repository at this point in the history
  • Loading branch information
@yebai
yebai authored Jul 1, 2023
1 parent 0a8c7cb commit 3aaaae1
Show file tree
Hide file tree
Showing 16 changed files with 951 additions and 860 deletions.
135 changes: 71 additions & 64 deletions tutorials/00-introduction/Manifest.toml
View file
Original file line number Diff line number Diff line change
Expand Up @@ -2,9 +2,9 @@

[[AbstractFFTs]]
deps = ["ChainRulesCore", "LinearAlgebra"]
git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0"
git-tree-sha1 = "8bc0aaec0ca548eb6cf5f0d7d16351650c1ee956"
uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c"
version = "1.3.1"
version = "1.3.2"

[[AbstractMCMC]]
deps = ["BangBang", "ConsoleProgressMonitor", "Distributed", "Logging", "LoggingExtras", "ProgressLogging", "Random", "StatsBase", "TerminalLoggers", "Transducers"]
Expand Down Expand Up @@ -75,9 +75,9 @@ version = "3.5.0+3"

[[ArrayInterface]]
deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"]
git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641"
git-tree-sha1 = "f83ec24f76d4c8f525099b2ac475fc098138ec31"
uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9"
version = "7.4.8"
version = "7.4.11"

[[ArrayInterfaceCore]]
deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"]
Expand Down Expand Up @@ -162,9 +162,9 @@ version = "0.5.1"

[[ChainRules]]
deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"]
git-tree-sha1 = "61549d9b52c88df34d21bd306dba1d43bb039c87"
git-tree-sha1 = "1cdf290d4feec68824bfb84f4bfc9f3aba185647"
uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2"
version = "1.51.0"
version = "1.51.1"

[[ChainRulesCore]]
deps = ["Compat", "LinearAlgebra", "SparseArrays"]
Expand All @@ -180,9 +180,9 @@ version = "0.1.7"

[[Clustering]]
deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"]
git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f"
git-tree-sha1 = "42fe66dbc8f1d09a44aa87f18d26926d06a35f84"
uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5"
version = "0.14.4"
version = "0.15.3"

[[CodecZlib]]
deps = ["TranscodingStreams", "Zlib_jll"]
Expand Down Expand Up @@ -232,9 +232,9 @@ version = "0.3.0"

[[Compat]]
deps = ["Dates", "LinearAlgebra", "UUIDs"]
git-tree-sha1 = "7a60c856b9fa189eb34f5f8a6f6b5529b7942957"
git-tree-sha1 = "4e88377ae7ebeaf29a047aa1ee40826e0b708a5d"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "4.6.1"
version = "4.7.0"

[[CompilerSupportLibraries_jll]]
deps = ["Artifacts", "Libdl"]
Expand Down Expand Up @@ -280,21 +280,15 @@ version = "1.15.0"

[[DataStructures]]
deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0"
git-tree-sha1 = "cf25ccb972fec4e4817764d01c82386ae94f77b4"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.18.13"
version = "0.18.14"

[[DataValueInterfaces]]
git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6"
uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464"
version = "1.0.0"

[[DataValues]]
deps = ["DataValueInterfaces", "Dates"]
git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf"
uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5"
version = "0.4.13"

[[Dates]]
deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
Expand Down Expand Up @@ -338,9 +332,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[Distributions]]
deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"]
git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b"
git-tree-sha1 = "e76a3281de2719d7c81ed62c6ea7057380c87b1d"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.25.95"
version = "0.25.98"

[[DistributionsAD]]
deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"]
Expand Down Expand Up @@ -381,11 +375,17 @@ git-tree-sha1 = "bdb1942cd4c45e3c678fd11569d5cccd80976237"
uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56"
version = "1.0.4"

[[ExceptionUnwrapping]]
deps = ["Test"]
git-tree-sha1 = "e90caa41f5a86296e014e148ee061bd6c3edec96"
uuid = "460bff9d-24e4-43bc-9d9f-a8973cb893f4"
version = "0.1.9"

[[Expat_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "bad72f730e9e91c08d9427d5e8db95478a3c323d"
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "4558ab818dcceaab612d1bb8c19cee87eda2b83c"
uuid = "2e619515-83b5-522b-bb60-26c02a35a201"
version = "2.4.8+0"
version = "2.5.0+0"

[[ExprTools]]
git-tree-sha1 = "c1d06d129da9f55715c6c212866f5b1bddc5fa00"
Expand All @@ -406,9 +406,9 @@ version = "4.4.2+2"

[[FFTW]]
deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"]
git-tree-sha1 = "06bf20fcecd258eccf9a6ef7b99856a4dfe7b64c"
git-tree-sha1 = "b4fbdd20c889804969571cc589900803edda16b7"
uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341"
version = "1.7.0"
version = "1.7.1"

[[FFTW_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
Expand Down Expand Up @@ -527,10 +527,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe"
version = "1.0.2"

[[HTTP]]
deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"]
git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272"
deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"]
git-tree-sha1 = "7f5ef966a02a8fdf3df2ca03108a88447cb3c6f0"
uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3"
version = "1.9.6"
version = "1.9.8"

[[HarfBuzz_jll]]
deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"]
Expand Down Expand Up @@ -635,9 +635,9 @@ version = "2.1.91+0"

[[KernelAbstractions]]
deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"]
git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4"
git-tree-sha1 = "b48617c5d764908b5fac493cd907cf33cc11eec1"
uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c"
version = "0.9.4"
version = "0.9.6"

[[KernelDensity]]
deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"]
Expand Down Expand Up @@ -819,9 +819,9 @@ version = "0.2.6"

[[MKL_jll]]
deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"]
git-tree-sha1 = "2ce8695e1e699b68702c03402672a69f54b8aca9"
git-tree-sha1 = "154d7aaa82d24db6d8f7e4ffcfe596f40bff214b"
uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7"
version = "2022.2.0+0"
version = "2023.1.0+0"

[[MLJModelInterface]]
deps = ["Random", "ScientificTypesBase", "StatisticalTraits"]
Expand Down Expand Up @@ -878,10 +878,10 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804"
uuid = "14a3606d-f60d-562e-9121-12d972cd8159"

[[MultivariateStats]]
deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsBase"]
git-tree-sha1 = "6d019f5a0465522bbfdd68ecfad7f86b535d6935"
deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"]
git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843"
uuid = "6f286f6a-111f-5878-ab1e-185364afe411"
version = "0.9.0"
version = "0.10.2"

[[NNlib]]
deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"]
Expand All @@ -890,9 +890,10 @@ uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd"
version = "0.8.21"

[[NaNMath]]
git-tree-sha1 = "b086b7ea07f8e38cf122f5016af580881ac914fe"
deps = ["OpenLibm_jll"]
git-tree-sha1 = "0877504529a3e5c3343c6f8b4c0381e57e4387e4"
uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3"
version = "0.3.7"
version = "1.0.2"

[[NamedArrays]]
deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"]
Expand Down Expand Up @@ -957,6 +958,12 @@ git-tree-sha1 = "13652491f6856acfd2db29360e1bbcd4565d04f1"
uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e"
version = "0.5.5+0"

[[Optimisers]]
deps = ["ChainRulesCore", "Functors", "LinearAlgebra", "Random", "Statistics"]
git-tree-sha1 = "e5a1825d3d53aa4ad4fb42bd4927011ad4a78c3d"
uuid = "3bd65402-5787-11e9-1adc-39752487f4e2"
version = "0.2.15"

[[Opus_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "51a08fb14ec28da2ec7a927c4337e4332c2a4720"
Expand All @@ -980,9 +987,9 @@ version = "0.11.17"

[[Parsers]]
deps = ["Dates", "PrecompileTools", "UUIDs"]
git-tree-sha1 = "5a6ab2f64388fd1175effdf73fe5933ef1e0bac0"
git-tree-sha1 = "4b2e829ee66d4218e0cef22c0a64ee37cf258c29"
uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
version = "2.7.0"
version = "2.7.1"

[[Pipe]]
git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d"
Expand Down Expand Up @@ -1218,9 +1225,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

[[SpecialFunctions]]
deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"]
git-tree-sha1 = "ef28127915f4229c971eb43f3fc075dd3fe91880"
git-tree-sha1 = "7beb031cf8145577fbccacd94b8a8f4ce78428d3"
uuid = "276daf66-3868-5448-9aa4-cd146d93841b"
version = "2.2.0"
version = "2.3.0"

[[SplittablesBase]]
deps = ["Setfield", "Test"]
Expand Down Expand Up @@ -1268,10 +1275,10 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
version = "1.3.0"

[[StatsPlots]]
deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"]
git-tree-sha1 = "2b35ba790f1f823872dcf378a6d3c3b520092eac"
deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"]
git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3"
uuid = "f3b207a7-027a-5e70-b257-86293d7955fd"
version = "0.15.1"
version = "0.15.5"

[[StringManipulation]]
git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123"
Expand Down Expand Up @@ -1331,10 +1338,10 @@ deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[[Tracker]]
deps = ["Adapt", "DiffRules", "ForwardDiff", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"]
git-tree-sha1 = "0874c1b5de1b5529b776cfeca3ec0acfada97b1b"
deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"]
git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f"
uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"
version = "0.2.20"
version = "0.2.25"

[[TranscodingStreams]]
deps = ["Random", "Test"]
Expand All @@ -1344,9 +1351,9 @@ version = "0.9.13"

[[Transducers]]
deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"]
git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37"
git-tree-sha1 = "a66fb81baec325cf6ccafa243af573b031e87b00"
uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999"
version = "0.4.76"
version = "0.4.77"

[[Turing]]
deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "Setfield", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker"]
Expand Down Expand Up @@ -1448,10 +1455,10 @@ uuid = "4f6342f7-b3d2-589e-9d20-edeb45f2b2bc"
version = "1.6.9+4"

[[Xorg_libXau_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "4e490d5c960c314f33885790ed410ff3a94ce67e"
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "6035850dcc70518ca32f012e46015b9beeda49d8"
uuid = "0c0b7dd1-d40b-584c-a123-a41640f87eec"
version = "1.0.9+4"
version = "1.0.11+0"

[[Xorg_libXcursor_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll", "Xorg_libXrender_jll"]
Expand All @@ -1460,10 +1467,10 @@ uuid = "935fb764-8cf2-53bf-bb30-45bb1f8bf724"
version = "1.2.0+4"

[[Xorg_libXdmcp_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "4fe47bd2247248125c428978740e18a681372dd4"
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "34d526d318358a859d7de23da945578e8e8727b7"
uuid = "a3789734-cfe1-5b06-b2d0-1dd0d9d62d05"
version = "1.1.3+4"
version = "1.1.4+0"

[[Xorg_libXext_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
Expand Down Expand Up @@ -1502,16 +1509,16 @@ uuid = "ea2f1a96-1ddc-540d-b46f-429655e07cfa"
version = "0.9.10+4"

[[Xorg_libpthread_stubs_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "6783737e45d3c59a4a4c4091f5f88cdcf0908cbb"
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "8fdda4c692503d44d04a0603d9ac0982054635f9"
uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74"
version = "0.1.0+3"
version = "0.1.1+0"

[[Xorg_libxcb_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"]
git-tree-sha1 = "daf17f441228e7a3833846cd048892861cff16d6"
deps = ["Artifacts", "JLLWrappers", "Libdl", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"]
git-tree-sha1 = "b4bfde5d5b652e22b9c790ad00af08b6d042b97d"
uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b"
version = "1.13.0+3"
version = "1.15.0+0"

[[Xorg_libxkbfile_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
Expand Down Expand Up @@ -1562,10 +1569,10 @@ uuid = "33bec58e-1273-512f-9401-5d533626f822"
version = "2.27.0+4"

[[Xorg_xtrans_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "79c31e7844f6ecf779705fbc12146eb190b7d845"
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "e92a1a012a10506618f10b7047e478403a046c77"
uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10"
version = "1.4.0+3"
version = "1.5.0+0"

[[Zlib_jll]]
deps = ["Libdl"]
Expand Down
Loading

0 comments on commit 3aaaae1

Please sign in to comment.