Merge pull request #64 from robbietuk/NormOutputCorrection

Remove addition of 1's to the ${OutputFilename}" sinogram
UCL · Mar 16, 2021 · ea4a62c · ea4a62c
2 parents 7009f94 + cd59d2a
commit ea4a62c
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/VoxelisedSimulation/SubScripts/EstimateGATESTIRNorm.sh b/VoxelisedSimulation/SubScripts/EstimateGATESTIRNorm.sh
@@ -83,7 +83,7 @@ if [ ${norm_template} != 0 ]; then
 	echo "Compressed Normalisation sinogram is saved as: ${OutputFilename}"
 else
 	## No template given, rename the ${OutputFilename}"_span1.hs" to ${OutputFilename}
-	stir_math -s --including-first --add-scalar 1 ${OutputFilename} ${OutputFilename}"_span1.hs"
+	stir_math -s ${OutputFilename} ${OutputFilename}"_span1.hs"
 	echo "Normalisation sinogram is saved as: ${OutputFilename}"
 fi