UMCU Genetics Custom Modules - Genome Diagnostics.
This repository contains custom nextflow processes and their dependent/linked files (scripts, dockerfiles etc.) used as submodule in our NGS workflows.
Utility functions are dinstinguished and can be found in Utils.
When nextflow processes or their dependent files are linked to another git repository, the files will be placed in a designated folder. For example: ClarityEpp folder and https://github.com/UMCUGenetics/clarity_epp
If a set of files is not per se a utility and doesnot have a separate repository, it is allowed to create a designated folder as well.
Build docker image for software dependencies.
- Install Docker Desktop
docker build -t organization_or_username/toolname:version -f path_to_dockerfile docker push organization_or_username/toolname:version
- If changes are required to the dockerfile, manually update label version.