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Document new features + docker #311

Merged

arnaudbore merged 19 commits into dev from doc_new-features

Jul 26, 2024

Member

SamGuay commented Jul 24, 2024

Takes care of #308 and #307 (partially)

SamGuay added 6 commits

July 24, 2024 09:17


          add --do_not_reorder_entities doc

cd163b3


          add bids_uri doc

3a3bf7f


          fix gha + order main commands

e9da2c5


          add readme me doc

e723e1b


          add do_not_reorder to advance comm

eeb7d61


          up py3.7 to 3.8

9cf58f9

Contributor

arnaudbore commented Jul 24, 2024 •

edited by SamGuay

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Check all references to python 3.7
Section container for the commands
Put containers in installation right before install binaries

SamGuay added 3 commits

July 24, 2024 12:21


          long due update for changelog

41fdaab


          add container doc

027d5fb


          bump version

5f7aee6

SamGuay changed the title ~~Doc new features~~ Document new features + docker

Member Author

SamGuay commented Jul 24, 2024 •

edited

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@arnaudbore I left the docker commands to you.

I leave it to you whether to add more details re bids_validator + pydeface...

SamGuay marked this pull request as ready for review

July 24, 2024 21:47


          update container with links

89445ca

arnaudbore requested a review from smeisler

July 25, 2024 17:48


          fix typo

d8f3482

SamGuay commented

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arnaudbore and others added 2 commits

July 25, 2024 14:42


          Update docs/how-to/container.md

8f6d1bf

Co-authored-by: Samuel Guay <samuel.guay@umontreal.ca>


          Update docs/how-to/container.md

d656c17

Co-authored-by: Samuel Guay <samuel.guay@umontreal.ca>

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arnaudbore and others added 3 commits

July 25, 2024 19:54


          Update docs/how-to/create-config-file.md

27dd27e

Co-authored-by: Steven Meisler <smeisler@g.harvard.edu>


          Apply suggestions from code review

5e645fd

Edited a bit to make sure dcm2bids_scaffold creates it in a newly created dir.

Co-authored-by: Steven Meisler <smeisler@g.harvard.edu>


          Update docs/get-started/install.md

0a30af6

Co-authored-by: Steven Meisler <smeisler@g.harvard.edu>

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SamGuay added 3 commits

July 26, 2024 08:42


          Apply ${VERSION} everywhere for consistency

17e8205


          add missing -e --containall

74f749b


          add export version to containers

e4b7123

arnaudbore merged commit fbb7384 into dev

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arnaudbore deleted the doc_new-features branch

July 26, 2024 13:56

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