Clean up some inconsistencies in filter documentation #2943
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There were several HDF5_PLUGIN_PATH that did not have the underscore escaped. A few other symbols with similar issues.
Fixed some code blocks that appeared broken on my markdown viewer... Not sure if that is the case in general.
There was a HDF5_PLUGIN_DIR referenced near the bottom. I think it was supposed to be _PATH, but could be wrong since there are multiple _DIR and _PATH througout the code and scripts...