OMOP to Cadence Converter

Requirements

• Python v3.9+
• Poetry

Instructions

Install packages:

poetry install

Run app:

poetry run streamlit run omop_to_cadence_converter/app.py

Run CLI:

poetry run python run omop_to_cadence_converter/convert_omop_to_cadence_csv.py

or

poetry run python run omop_to_cadence_converter/convert_omop_to_cadence_postgres.py

Run tests:

poetry run pytest