title: Consumption of golden berries (Physalis peruviana L.) might reduce biomarkers of oxidative stress and alter gut permeability in men without changing inflammation status or the gut microbiota
authors: Jelver A. Sierra, Juan S. Escobar, Vanessa Corrales-Agudelo, Oscar J. Lara-Guzman, Eliana P. Velasquez-Mejia, Juan C. Henao-Rojas, Alejandro Caro-Quintero, Fabrice Vaillant, Katalina Muñoz-Durango
journal: Food Research International 162 (2022) 111949
doi: https://doi.org/10.1016/j.foodres.2022.111949
Code to reproduce the results obtained in the mentioned paper
The following files are included:
- golden_berry.Rmd: R notebook to reproduce the results
- golden_berry.otus.xlsx: OTU table
- golden_berry.taxonomy.xlsx: taxonomy table
- golden_berry.meta.xlsx: metadata
- golden_berry.tre: phylogenetic tree
- path_abun_unstrat2.tsv: unstratified Metacyc pathway prediction (obtained with picrust2)
- pred_metagenome_unstrat2.tsv: unstratified KEGG ortholog prediction (obtained with picrust2)