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add queries for transcriptomics #329

add queries for transcriptomics

add queries for transcriptomics #329

name: Jupyter Notebook checks
on: [push, release]
jobs:
notebooks:
name: "Build the notebooks for the docs"
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- name: Set up Python
uses: actions/setup-python@v2
with:
python-version: 3.9
- name: Install dependencies
run: |
python -m pip install -U pip
python -m pip install -r .github/workflows/requirements.txt
- name: Execute the notebooks
run: |
jupyter nbconvert --to notebook --execute --ExecutePreprocessor.timeout=600 docs/source/tutorials/*.ipynb
- uses: actions/upload-artifact@v2
with:
name: notebooks-for-${{ github.sha }}
path: docs/tutorials