Merge branch 'master' into cell_types_by_gene

.github/workflows/test_notebooks.yml

@@ -6,7 +6,7 @@ jobs:
     name: "Build the notebooks for the docs"
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
 
       - name: Set up Python
         uses: actions/setup-python@v2

.github/workflows/test_vfb-connect.yml

@@ -6,7 +6,7 @@ jobs:
     name: "Test VFB_connect"
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
 
       - name: Set up Python
         uses: actions/setup-python@v2

requirements.txt

@@ -20,3 +20,4 @@ matplotlib>3.9
 seaborn>0.13
 fonttools>=4.43.0 # not directly required, pinned by Snyk to avoid a vulnerability
 pillow>=10.3.0 # not directly required, pinned by Snyk to avoid a vulnerability
+plotly