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fix domain list #12

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merged 3 commits into from
Jul 15, 2024
Merged

fix domain list #12

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ebeb476
fix domain list
larsbuntemeyer Jul 15, 2024
199e6fc
fix plotting
larsbuntemeyer Jul 15, 2024
0a55abb
migrate to setup-micromamba
larsbuntemeyer Jul 15, 2024
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7 changes: 3 additions & 4 deletions .github/workflows/build-pdf.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -27,13 +27,12 @@ jobs:
echo "PYTHON_VERSION=${{ matrix.python-version }}" >> $GITHUB_ENV

- name: Create conda environment
uses: mamba-org/provision-with-micromamba@main
uses: mamba-org/setup-micromamba@v1
with:
cache-downloads: true
cache-downloads-key: "${{runner.os}}-${{runner.arch}}-py${{matrix.python-version}}-${{hashFiles(env.CONDA_ENV_FILE)}}"
micromamba-version: 'latest'
cache-downloads-key: "${{runner.os}}-${{runner.arch}}-py${{matrix.python-version}}"
environment-file: archive-specifications/environment.yml
extra-specs: |
create-args: >-
python=${{ matrix.python-version }}

- name: Version info
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7 changes: 3 additions & 4 deletions .github/workflows/deploy.yml
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Expand Up @@ -26,13 +26,12 @@ jobs:
echo "PYTHON_VERSION=${{ matrix.python-version }}" >> $GITHUB_ENV

- name: Create conda environment
uses: mamba-org/provision-with-micromamba@main
uses: mamba-org/setup-micromamba@v1
with:
cache-downloads: true
cache-downloads-key: "${{runner.os}}-${{runner.arch}}-py${{matrix.python-version}}-${{hashFiles(env.CONDA_ENV_FILE)}}"
micromamba-version: 'latest'
cache-downloads-key: "${{runner.os}}-${{runner.arch}}-py${{matrix.python-version}}"
environment-file: archive-specifications/environment.yml
extra-specs: |
create-args: >-
python=${{ matrix.python-version }}

- name: Version info
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26 changes: 22 additions & 4 deletions scripts/create-domain-plots.py
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Expand Up @@ -135,11 +135,11 @@ def create_subsection(domain_id, fmt):
return text


def create_domain_section(template, fmt):
def create_domain_section(template, fmt, domain_ids):
text = "## Overview\n\n"
table = getattr(df.reset_index(), f"to_{fmt}")(index=False)
text += f"{table}\n\n"
text += "\n".join(create_subsection(d, fmt) for d in df.index)
text += "\n".join(create_subsection(d, fmt) for d in domain_ids)
with open(template, "r") as f:
tpl = f.read()
with open(op.join(bookpath, "domains.md"), "w") as f:
Expand All @@ -154,8 +154,26 @@ def create_domain_section(template, fmt):
except Exception:
fmt = "html"

for domain_id in df.index:
domain_ids = [
"SAM-50",
"CAM-50",
"NAM-50",
"EUR-50",
"AFR-50",
"WAS-50",
"EAS-50",
"CAS-50",
"AUS-50",
"ANT-50",
"ARC-50",
"MED-50",
"MNA-50",
]

for domain_id in domain_ids:
print(domain_id)
plot_domain(domain_id)

create_domain_section(template=op.join(bookpath, "domains.tpl"), fmt=fmt)
create_domain_section(
template=op.join(bookpath, "domains.tpl"), fmt=fmt, domain_ids=domain_ids
)