Code

Yash refactor#254

Code

Merged

coalsont merged 21 commits intomasterWashington-University/HCPpipelines:masterfrom Yash_RefactorWashington-University/HCPpipelines:Yash_RefactorCopy head branch name to clipboardDec 19, 2023

+2,522-4,564

Commits

Commits on Nov 22, 2023

• add set -E to debug.shlib, cleanup and style

  coalsont

  committed
  ff2dff1

• Finsihed testing of prefreesurfer, with updates to pipeline scripts

  

  ythackerCS

  authored and

  coalsont

  committed
  c9c2d82

• Finished testing of fMRIVolume along with pipeline scripts.

  

  ythackerCS

  authored and

  coalsont

  committed
  8b78137

• Cleaned up prefreesurfer comments that were unnecessary.

  

  ythackerCS

  authored and

  coalsont

  committed
  3d28db5

• Removed unecessary commented lines.

  

  ythackerCS

  authored and

  coalsont

  committed
  cf3cf99

• Removed commented out opts parsing lines from fMIRVolume scripts

  

  ythackerCS

  authored and

  coalsont

  committed
  d7fc50d

• Finished testing of FMRISurface

  

  ythackerCS

  authored and

  coalsont

  committed
  bf1e3e3

• Postfix and ReapplyFix tested and run successfully.

  

  ythackerCS

  authored and

  coalsont

  committed
  6f22468

• Fixed all comments from github and commiting non-pipeline specific files.

  

  ythackerCS

  authored and

  coalsont

  committed
  5bdc932

• Addressed additional comments by Tim and removed old code.

  

  ythackerCS

  authored and

  coalsont

  committed
  e979b4a

• Addressed last few comments by Tim on msm and make avg.

  

  ythackerCS

  authored and

  coalsont

  committed
  274c93f

• various cleanup and fixes, help info displays at least

  coalsont

  committed
  f7ba047

• Additional cleanup

  coalsont

  committed
  2b8668b

• more cleanup

  coalsont

  committed
  cc33ada

• restore definition of script_name for info function

  coalsont

  committed
  c128776

• replace ls with glob, quoting

  coalsont

  committed
  cdfa0c7

• remove stay opts_DefaultOpt

  coalsont

  committed
  3f19971

• stop matlab from expecting binary .mat format from melodic_mix

  coalsont

  committed
  94cfc83

• set another load() to ascii, for safety

  coalsont

  committed
  f011bf8

• Fixed an unbound variable issue in PostFix.

  

  demsarjure

  authored and

  coalsont

  committed
  48c123a

• Make even/odd checking use Pos_Neg_b0

  coalsont

  committed
  84a6729